| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1368 |
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| Symbol | |
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| ID | 4276975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1626857 |
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| End bp | 1627906 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134143 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_750059 |
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| Protein GI | 114562546 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGA CAGATTTACA TCCTCTTGAG CAAGCAGCGC TTACGCAATT ATCAGTGTCG
GTCAACAAAG TGTTTGTAAC CGGAGCAGGC GGCTTTTTAG GATTGGCGAT TTGTCAGCGC
TTATTGGCAG TAGGTATTCA GGTGGTGGGC TTTGCCCGTG GTGATTATCC AAGACTGGTT
GAACTGGGCG TCGATATGCG CCAAGGCGAT ATCAGCGACT ACGATAACGT TAAACAAGCC
ATGCAAGGCT GTGACTTAGT GTTTCATGTG GCCTCAAAGG CTGGGGTGTG GGGCAGTAAG
CAAAGTTATT ACTCACCTAA TGTTGATGGC GTAAATAATA TTATTAATGC CTGTAAAGCG
CTTAATATTC AACGTTTAGT CTACACCAGT ACCCCAAGCG TGACCTTTGC AGGGCGTGAC
GAAAACGGCA TTAATGAATC AGCGCCTTAC GCTGAAACAT ACCTCAATTA CTACGGCGAA
TCTAAAGCCA TCGCAGAGCA ACATGTGCTT GCCGCTAATT CTGCTCAACT TCACACTACA
GCCTTACGAC CACATTTGAT TTGGGGACCA AACGATCCTC ATCTTGTGCC AAGAGTAATT
GAACGCGCGC GGGCAGGGCG ACTAAAGCTA GTTGGCCATG AAGACAAACT GGTCGATACC
ATTTATGTTG ATAACGCAGC TTATGCTCAT GTTTTAGCGG CGTTAGATTT AGTCACTAAT
GCTAAGTGCG CAGGTAAAGC GTATTTTTTA AGTAATGATC AACCCATTAC CATGGCAGAT
ATGCTTAATC GTATTCTAGC CAGTGTTGAT TTACCGCCAG TAACCAAGCG CGTGCCAGCC
GGTGTTGCTT ACGCTGCAGG CGTGGTGCTT GAGACCGTAT ACGGTTTGCT GAATAAATCG
CAAGAACCCA TCATGACTCG TTTTGTTGCA AGACAGCTCT CAACCAGCCA TTACTTTGAC
ATCAGCGCCG CCAAACAAGA CTTAGGCTAC CAACCGCTTA TTAGCCTTGA GCAAGGTATG
CAAAAACTGA AGCAATCTTT GTCGAACTAA
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| Protein sequence | MDLTDLHPLE QAALTQLSVS VNKVFVTGAG GFLGLAICQR LLAVGIQVVG FARGDYPRLV
ELGVDMRQGD ISDYDNVKQA MQGCDLVFHV ASKAGVWGSK QSYYSPNVDG VNNIINACKA
LNIQRLVYTS TPSVTFAGRD ENGINESAPY AETYLNYYGE SKAIAEQHVL AANSAQLHTT
ALRPHLIWGP NDPHLVPRVI ERARAGRLKL VGHEDKLVDT IYVDNAAYAH VLAALDLVTN
AKCAGKAYFL SNDQPITMAD MLNRILASVD LPPVTKRVPA GVAYAAGVVL ETVYGLLNKS
QEPIMTRFVA RQLSTSHYFD ISAAKQDLGY QPLISLEQGM QKLKQSLSN
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