| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1365 |
|---|
| Symbol | |
|---|
| ID | 4276972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1623023 |
|---|
| End bp | 1624072 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638134140 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_750056 |
|---|
| Protein GI | 114562543 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT CACGCGTCTT TATCAATAGT CTGGCTTATG AGCTAGCACC ACAAGTAGTG
TCGAGTAGCG ATTTAGAATC TCGCTTGGCC CCGCTTTATC AAAAGTTTCG TATTCCGATG
GGGCAACTTG CCGCATTAAC CGGAATTACC GAGCGTCGTT GGTGGCCTAA AGGTCATCGT
TTATCAGACG GCGCTATTGC TGCTGCACGT AAAGCCGTGA ATGAAACCGG CATTAATGTC
AGCGACTTAG GTGCCGTGGT ATACACTGGT GTGTGTCGTG ATCAACACGA ACCCGCAACC
GCTTGCCGTA TTGCTGCCGA ACTTGGCGTG TCTAAAGACA CTGCCATTTA TGACATCAGC
AATGCTTGTT TAGGGGTGTT GTCGGGTATT TTGGATATTG CCAATCGTAT CGAACTTGGT
CAAATCAAAG CAGGAATGGT TGTGTCGTGC GAATCTGCAC GAGACATCGT CGATGCCACA
ATTGACCACA TGCTAGCCGA ACCGACAATG CAAAACTTTG CCCAGTCATT GGCAACGCTT
ACGGGCGGTT CAGGCGCAGT TGCTGTTATT TTAACTGACG GCAGCTTGCC ACTCACCACC
ACGCGTCAGC ATCAGCTATT AGGTGCCAGT CATTTGTCTG CACCAGAGCA TCACCAATTG
TGTCAATGGG GCCTACAAGA AGCTGGGCAC TTATTATATC GCGAGTTTAT GCGTACCGAT
GCAGTTACCT TGCTTAAAGA AGGCGTAGAG CTTGCTAAGC ACACTTGGGA GCATTTCCTA
GAGCAGCGTG ATTGGGTTGT TGAGCAAGTT GATAAAGTGA TTTGTCACCA AGTAGGTGCA
TCAAACCGCC GACAAGTGCT AAATGCATTA AACATCCCCC ACGAAAAAGA ATATCCCACC
TATCAAACCT TAGGCAACAT GGGCACGGTT TCACTACCGG TTACTGCTGC AATTGCCCAC
GATGAAGGTT TTTTACGTGT TGGCGACCAA GTCAGCTTTT TAGGGATAGG CAGTGGTTTG
AACTGCATGA TGTTAGGAAT TAAGTGGTAA
|
|---|
| Protein sequence | MKYSRVFINS LAYELAPQVV SSSDLESRLA PLYQKFRIPM GQLAALTGIT ERRWWPKGHR
LSDGAIAAAR KAVNETGINV SDLGAVVYTG VCRDQHEPAT ACRIAAELGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGMVVSC ESARDIVDAT IDHMLAEPTM QNFAQSLATL
TGGSGAVAVI LTDGSLPLTT TRQHQLLGAS HLSAPEHHQL CQWGLQEAGH LLYREFMRTD
AVTLLKEGVE LAKHTWEHFL EQRDWVVEQV DKVICHQVGA SNRRQVLNAL NIPHEKEYPT
YQTLGNMGTV SLPVTAAIAH DEGFLRVGDQ VSFLGIGSGL NCMMLGIKW
|
|---|
| |