| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1358 |
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| Symbol | |
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| ID | 4276965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1616024 |
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| End bp | 1617685 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134133 |
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| Product | phosphate ABC transporter, inner membrane subunit PstA |
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| Protein accession | YP_750049 |
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| Protein GI | 114562536 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4985] ABC-type phosphate transport system, auxiliary component |
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| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.221857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGT GGTTTAAATC AGGTTCACCG TGGATTTGGA TGACCGGTGG TGCCGTTAGT
ATCAGTTTGA TTGCCGTTTT AGGCTTACTA CTGTTAATCG CTTGGCGTGG CTTGAGTTAC
TTTTGGCCTG CTGATGTTTA TGAATGGCAA CTCGAAGACA ACAATGGTGT TAAAAGTACC
TTAATTGGTG AGATTTACGA CCGTGAAGAG GTGCCTACAG AGCGCTTAAT TTCAGCTGGT
CATAAATTTA CCAAACACCC TGGTGAGTTT GTTACTCGTT ACTTGGTAAA AACCGGTAAC
CGTGAGTTTG TTGGTTTAGA TTTCCGTTGG ATTTTGGGAA CCGATATCGT TAGCCGCTCT
ATGCCCGCTG ATGTCGCGAA ACTTGAACGG ACGAAAAACG GTAATTTTTA CGGTTATCCT
GTTGCGGTAA TCGAAGACGG TAAACGTTTA GAGTTAACTA ATGAAGCAGA CATAGAAGCG
TCTTTGTTCG ACCATATCGA CCGCGCTGTG GCGATTTCTG ATCAAGCCTT GGCGTTGCAA
AAAAGCGATA TTGGCTCGAT AAATTATCAA ATGGAACGTC TACGTTTGAA AGAGCGTGGT
TATGAGCTTG ATGGGGAATT AACCGCCGAG CGTAAAGCGG ATATCAAGGC GCAAATTGGA
CAGCTTAACA AAGATTACTT AGTGCTTGAA AAAGACTTGT TTGCTCTGCG TGACAAAGCC
GCTCGTGATT CTGTTGTAGT GAAAGATATG CGCGGTGTTG AAGTCACCTT GCAACTGGAC
TCTATTTTAG ACGTCAGTTA CGTCAATCAC ATGAACTTAC TCGGTAAAGT GGGCCACTGG
TTTGTGGGAA TTGGTCGCTT TGTTAGTGAT GACCCACGTG AAGCCAATAC TGAAGGTGGT
GTTTTTCCCG CTATTTTTGG TACGGTATTT ATGGTGATGC TCATGGCTGT TATCGTAACG
CCATTTGGGG TTATTGCTGC TATTTACTTG CATGAATACG CCAAGAAAGG CCCTATTACT
AAGCTTATCC GTATTGCGGT AATTAACTTA GCCGGTGTAC CGTCAATTGT TTATGGTGTG
TTTGGTTTAG GTTTCTTTGT GTACATGATG GGCGGCTCAA TTGACCAATT GTTCTTCCCT
GAGGCGTTAC CAGCACCCAC ATTTGGCTCT CCTGGAGTGA TTTGGTCTGC ATTAACCTTA
GCCATTTTAA CCTTGCCAGT GGTCATTGTA TCAACCGAAG AAGGCTTAAG CCGAATTCCG
AGTGCAGTGC GTCAAGGCAG CTTAGCATTA GGCGCGACTA AAGCTGAGAC CTTATGGCGC
ATTGTGATCC CAATGGCAAG CCCAGCAATT ATGACGGGTT TGATTTTAGC CGTGGCACGT
GCCGCCGGTG AAGTGGCTCC GTTGATGTTA GTGGGTGTGG TAAAATTAGC TCCAACATTA
CCGATTGATA TGAACTTCCC GTTTGTGCAT TTAGAACGTA AGTTCATGCA CTTAGGTTTC
CATATTTACG ATGTAGGCTT CCAAAGCCCT AACGTAGAAG CAGCACGCCC ATTGGTGTAT
GCAACTTCGT TCTTATTAGT ATCTGTAATT GTTGCTCTTA ATTTAACCGC TATCAGCGTG
CGCAACCATT TACGTGAAAA ATTCCGTTCG CTAGAACATT AA
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| Protein sequence | MGKWFKSGSP WIWMTGGAVS ISLIAVLGLL LLIAWRGLSY FWPADVYEWQ LEDNNGVKST
LIGEIYDREE VPTERLISAG HKFTKHPGEF VTRYLVKTGN REFVGLDFRW ILGTDIVSRS
MPADVAKLER TKNGNFYGYP VAVIEDGKRL ELTNEADIEA SLFDHIDRAV AISDQALALQ
KSDIGSINYQ MERLRLKERG YELDGELTAE RKADIKAQIG QLNKDYLVLE KDLFALRDKA
ARDSVVVKDM RGVEVTLQLD SILDVSYVNH MNLLGKVGHW FVGIGRFVSD DPREANTEGG
VFPAIFGTVF MVMLMAVIVT PFGVIAAIYL HEYAKKGPIT KLIRIAVINL AGVPSIVYGV
FGLGFFVYMM GGSIDQLFFP EALPAPTFGS PGVIWSALTL AILTLPVVIV STEEGLSRIP
SAVRQGSLAL GATKAETLWR IVIPMASPAI MTGLILAVAR AAGEVAPLML VGVVKLAPTL
PIDMNFPFVH LERKFMHLGF HIYDVGFQSP NVEAARPLVY ATSFLLVSVI VALNLTAISV
RNHLREKFRS LEH
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