Gene Sfri_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1355 
Symbol 
ID4277889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1612094 
End bp1612912 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content39% 
IMG OID638134130 
Producthypothetical protein 
Protein accessionYP_750046 
Protein GI114562533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGAA CGCTATCAAA ACTGAAAACC CACCTCAATG ATAACCATGA GGTGGAATAC 
CATTTACCTG TTGGTGAAGC GCGTTTAGCC CTTAACCCGC TTATTGGTAA GTCATTAACC
ATGACTCATA CAGGTAATAT TTTTTGCAGC AACTGCGGTA AAAAGACCAA GAAAAGTTAT
TCTCAAGGTC ACTGCTACGT ATGCATGTCA AAACTGGCCA GTTGCGACTT GTGTATAATG
AAACCAGAAA CATGCCATTT TGATCAAGGT ACTTGTCGCG AGCCAGAATG GGCCATGTCA
AATTGCTTTG TACCCCACTA TGTTTATTTA TCGAACACTT CAGGCATTAA AGTCGGTATT
ACCCGCCATA CTCAAATCCC AACCCGTTGG ATAGACCAAG GCGCAACCCA AGGCTTACCT
ATTTTTAAAG TGTCGACACG TAAAATGTCA GGCTTAATTG AAATTGAATT AGCCAAATTC
ATTAACGACA AAACCCATTG GCAGGCTATG CTAAAAGGTC ATAATGATGA TGTCGATTTG
GTTGAACAAG CAGCCCAACT TATCCCGTTA ATTGAAGATA AACTGCAAGC TCTCGCGGCC
GAATACCAGG ACATTGTTAT TGAACGTCTA GACGCGAACA TTCAAGCCAT TAGTTACCCA
ATAACGCAAT TTCCTATTAA AGTTAAATCG CATAATTTTG ATAAAATTGC TGAAGTAACA
GGTATTTTGC AGGGCATTAA AGGCCAATAC CTTATTTTTG ATACTGGTGT GATTAATATT
CGTAAATTCT CATCTTACGA AATCGAAGTG AGCTATTAA
 
Protein sequence
MFGTLSKLKT HLNDNHEVEY HLPVGEARLA LNPLIGKSLT MTHTGNIFCS NCGKKTKKSY 
SQGHCYVCMS KLASCDLCIM KPETCHFDQG TCREPEWAMS NCFVPHYVYL SNTSGIKVGI
TRHTQIPTRW IDQGATQGLP IFKVSTRKMS GLIEIELAKF INDKTHWQAM LKGHNDDVDL
VEQAAQLIPL IEDKLQALAA EYQDIVIERL DANIQAISYP ITQFPIKVKS HNFDKIAEVT
GILQGIKGQY LIFDTGVINI RKFSSYEIEV SY