| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1349 |
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| Symbol | |
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| ID | 4277883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1605047 |
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| End bp | 1606615 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134124 |
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| Product | ABC transporter related |
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| Protein accession | YP_750040 |
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| Protein GI | 114562527 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTG GCGCTAAGCC ACTGTTTGAA AATCTCTCAG TAAAATTTGG TGGCGGTAAT
CGCTACGGTT TAATTGGCGC GAATGGTTGT GGTAAATCCA CCTTTATGAA AATCCTTGCC
GGTGATTTAG AGCCATCAAG CGGTAACGTC TCTATAGATG TTAACGAACG CATGGGTAAA
TTAAACCAGG ATCAGTTTGC CTACGAAAGT TTTTCAGTCG TTGACACCGT GATCATGGGC
CACAAAGAGT TGTGGGAGGT CAAGCAAGAG CGTGATCGTA TTTATTCTTT ACCTGAAATG
AGTGAAGAAG ACGGAATCAA AGTTTCTGAG CTTGAGATGG AATTTGCTGA AATGGACGGT
TACACTGCCG AATCTCGCGC AGGTGACTTA CTTTTAGGCG TGGGCATTGC CATTGAACAA
CATTTCGGTT TAATGAGTGA GATTGCACCA GGCTTTAAAT TGCGGGTGTT ATTGGCGCAA
GCATTATTCT CAAACCCAGA TTTACTGTTA CTTGATGAAC CTACCAACAA CTTGGACATC
GATACTATTC GATGGTTACA AGACATGTTG AACCAACGTA ACAGCACCAT GATTATTATT
TCGCATGACC GTTATTTCTT AAACTCAGTG TGTACTCACA TGGCTGACTT AGATTACGGT
GAACTACGAG TGTTCCCTGG CAACTACGAC GAATACATGA TGGCTGCACA GCAATCACGT
GAACGTTTAA TGAGTGACAA CGCCAAGAAA AAAGCGCAAA TAGCTGAATT ACAAACGTTC
GTCGCACGTT TCTCTGCCAA CGCATCTAAA GCTAAACAAG CTACATCACG CGCTAAGCAA
ATTGATAAAA TTAAGCTTGA TGACATCAAA GCATCGAGCC GTGTAAACCC ATTTATTCGT
TTCGAACAAG AAAAGAAATT GTTCCGTAAT GCACTTGTGG TTGAAAATTT AGCCAAAGGT
TACGACAAAC CATTATTTAG CAAGCTTAAC CTAATGGTTG AAGTGGGTGA GAGAATTGCT
ATCTTGGGTC AGAACGGTAT TGGTAAAACG ACTTTATTAC GCACTTTAGT TCATGATATT
CCACAAGACG AAGGAACGAT TAATTGGTCT GAAAATGCCA ATATTGGTTA CTACGCACAG
GATCATGAAG CTGATTTTGC TAATGACATG ACTTTGTTCG AATGGATGAG TCAATGGCGT
AAAGAAAACG ATGATGATCA ATCCGTTCGC GGTATTTTAG GTCGTATGTT GTTTGGTGCA
GATGACATTA AAAAGTCAGT TAAAGTGTTG TCTGGTGGTG AGAAAGGCCG TATGTATTTC
GGTAAACTTA TCATGCAAAA AGCCAACATT TTGTTACTCG ATGAGCCAAC CAACCACATG
GATATGGAAT CTATTGAGTC ATTAAACAAT GCGCTTGAAA AATACGAAGG CACCTTAATG
TTCGTCTCAC ATGACCGTGC ATTCGTTTCA TCTTTGGCCA CACGTATTAT TGAAATTACT
GAAACCGGTA TTAATGATTT CAAAGGCTCT TACGACGAAT TTTTGGCAAG TAAAGGTATC
GACGCGTAA
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| Protein sequence | MQFGAKPLFE NLSVKFGGGN RYGLIGANGC GKSTFMKILA GDLEPSSGNV SIDVNERMGK
LNQDQFAYES FSVVDTVIMG HKELWEVKQE RDRIYSLPEM SEEDGIKVSE LEMEFAEMDG
YTAESRAGDL LLGVGIAIEQ HFGLMSEIAP GFKLRVLLAQ ALFSNPDLLL LDEPTNNLDI
DTIRWLQDML NQRNSTMIII SHDRYFLNSV CTHMADLDYG ELRVFPGNYD EYMMAAQQSR
ERLMSDNAKK KAQIAELQTF VARFSANASK AKQATSRAKQ IDKIKLDDIK ASSRVNPFIR
FEQEKKLFRN ALVVENLAKG YDKPLFSKLN LMVEVGERIA ILGQNGIGKT TLLRTLVHDI
PQDEGTINWS ENANIGYYAQ DHEADFANDM TLFEWMSQWR KENDDDQSVR GILGRMLFGA
DDIKKSVKVL SGGEKGRMYF GKLIMQKANI LLLDEPTNHM DMESIESLNN ALEKYEGTLM
FVSHDRAFVS SLATRIIEIT ETGINDFKGS YDEFLASKGI DA
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