| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1343 |
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| Symbol | |
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| ID | 4277877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1599096 |
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| End bp | 1599995 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134118 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_750034 |
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| Protein GI | 114562521 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.383496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAG TAGCATTTAT TGGTTTAGGT AACATGGGTG GCCCAATGGC GGCCAATTTA
ATTAAAGCGG GTATGACAGT CACAGTGTTT GACTTAAATC CTACAGCAGT CGAAGCGTTA
ACAGCGCAAG GTGCACTCAG CGCTAAAACA GCATGCGGCG CAGCGGCAGC CGCCGATTTT
GTGATTACCA TGCTGCCAGC AGGCAAGCAT GTACGCAGCT TGTACCTAGG CGATGACAAT
AATAAAGGTT TGTTAGATGT CGTGTCTAAA CAGGCATTAT TGATAGATTG CTCAACCATT
GATGCCGACA GCGCCCGTTT AGTTGGGGCA AAAGCCGCTG AAAAGGGCAT CGAATTTATG
GATGCGCCAG TATCTGGCGG TACAGCAGGC GCAGCTGCCG GTACCTTAAC CTTTATTTGT
GGTGGTAGTG AAGCCGCCTA TCAACAAGCC CAAACGGTAT TAACGGTTAT GGGTGGCAAT
ATATTTCACG CCGGTGCAGT AGGTGCAGGT CAAATAGCAA AGATTTGTAA TAACATGCTG
TTGTCTGTAT TGATGGTGGG TACTAGCGAA TCGTTACAAC TTGGTTTGGA TAATGGTTTA
GATCCTAAAG TGTTGTCTGA TATCATGAAA GTCAGTAGCG GCGGTAACTG GACGTTAGAA
AAGTACAACC CATGCCCAGA TGTGATGGAA AATGTGCCGT CGTCAAAAGA TTACCAAGGT
GGTTTTATGG TTGACTTGAT GGTTAAAGAT TTAGGGTTGT CGCAAGAAGC GGCAGTCGCC
TCTAATTCAA GTACACCTAT GGGGTCCTTG GCTCGTAGCT TATATGTTAA TCATGCTCGC
CAAGGCCATG GTCGTCGCGA TTTTTCGAGT ATTTTTGAAC AATTTTCAAA GAAAAAATAA
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| Protein sequence | MATVAFIGLG NMGGPMAANL IKAGMTVTVF DLNPTAVEAL TAQGALSAKT ACGAAAAADF
VITMLPAGKH VRSLYLGDDN NKGLLDVVSK QALLIDCSTI DADSARLVGA KAAEKGIEFM
DAPVSGGTAG AAAGTLTFIC GGSEAAYQQA QTVLTVMGGN IFHAGAVGAG QIAKICNNML
LSVLMVGTSE SLQLGLDNGL DPKVLSDIMK VSSGGNWTLE KYNPCPDVME NVPSSKDYQG
GFMVDLMVKD LGLSQEAAVA SNSSTPMGSL ARSLYVNHAR QGHGRRDFSS IFEQFSKKK
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