| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1339 |
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| Symbol | |
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| ID | 4278013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1594314 |
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| End bp | 1595807 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134114 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_750030 |
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| Protein GI | 114562517 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACAC AAGTTAAGCA TTATATTGAT GGCGAATTCA CTTATGGCAG CGGAGATCGC
AATATTGATG TGACCAACCC GGCCAATAAT AGCGTTATTG CTAAAATTAA TTGCGCTACC
ACTGCCGAAG TTGAGCAGGC CATTCACAGT GCTAAAGAAG CATTTAAAAC GTGGAAAGAA
GTCCCTGTGT CTGAACGTGC GCGCGTCATG TTGCGTTACC AACATTTACT CAAAGAGCAT
CACGACGAAC TGGCGACCAT TTTGGCGCAA GAAACCGGTA AAACATTTGA AGATGCTAAA
GGCGATGTAT GGCGCGGCAT TGAAGTAGCT GAACATGCTT GTGGTGTTGC GTCGTTAATG
ATGGGTGAAA CTGTTGAAAA CGTCGCTCGA AATATCGATA CCTATAGCTA CACTCAACCA
TTAGGTGTGT GTGCGGGTAT TACCCCATTC AACTTCCCAG CAATGATCCC GCTATGGATG
TTCCCGTTAT CGATTGCTTG CGGTAACACG TTTATTTTAA AGCCGTCAGA ACAAGATCCT
ATGACGCCAC AGCGTTTAGT TGAATTGTTT GTTGAAGCAG GCGCGCCAAA AGGCGTGTTG
CAACTTATTC ATGGCGACAA AACAGCAGTA GACATCTTGC TAAGAGACCC AGCCATTAAA
GCGATTTCGT TTGTTGGTTC TGTGGGGGTT GGTCAATACA TTTACAAAAC CGGTACCGAC
AATCTAAAGC GTGTGCAAGC GTTTGCAGGA GCTAAAAACC ATTGCGTGAT CATGCCTGAT
GCGAACAAGC AGCAAGTGAT CAATAACATG GTTGGTGCCT CTGTTGGTGC TGCCGGTCAG
CGTTGTATGG CGATTTCAGT CGCTATTTTT GTGGGTAAAG CTAAAGAATG GATCCCTGAA
TTAAAAGAAG CGTTAGCTAA AGTTCGTCCT GGTTTATGGG ATGACAAAGA AGCTGCTTAC
GGTCCAGTTA TCAGTCCAGC AGCAAAAGAG CGTGTACTAA AACTGATTGC TCAAGGTAAA
GCTGAAGGTG CTGATTGCTT ACTCGATGGA ACCGATTTTA CCGTTGCAGG TTACGAGTCG
GGTAACTGGG TTGGCCCAAC CATGTTTACC AATGTCACCA CCGACATGAG CATTTACAAA
GAAGAAATAT TTGGCCCAGT ACTGTGTTGT ATGGAAGCGG ATAACTTAGA CGATGCTATC
GAACTGGTTA ACAACAGCCC ATACGGCAAC GGCACTTCAA TCTTTACTGC ATCAGGCGGC
GCAGCGCGTA AATATCAACA TGAAATTGAA GTAGGCCAAG TGGGTATTAA CGTGCCAATT
CCTGTGCCAT TACCTTTCTT CTCGTTCACT GGATGGAAAG GCAGTTTCTA TGGCGACCAA
CACGCCTACG GCAAGCAAGC GGTGCGCTTC TGCACCGAAA CCAAAACCAT CACAACTCGT
TGGTTTGACT CAGAAGCCGT TAGCGGTCCT AACATGAGTA TTGATCTTAA ATAG
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| Protein sequence | MITQVKHYID GEFTYGSGDR NIDVTNPANN SVIAKINCAT TAEVEQAIHS AKEAFKTWKE
VPVSERARVM LRYQHLLKEH HDELATILAQ ETGKTFEDAK GDVWRGIEVA EHACGVASLM
MGETVENVAR NIDTYSYTQP LGVCAGITPF NFPAMIPLWM FPLSIACGNT FILKPSEQDP
MTPQRLVELF VEAGAPKGVL QLIHGDKTAV DILLRDPAIK AISFVGSVGV GQYIYKTGTD
NLKRVQAFAG AKNHCVIMPD ANKQQVINNM VGASVGAAGQ RCMAISVAIF VGKAKEWIPE
LKEALAKVRP GLWDDKEAAY GPVISPAAKE RVLKLIAQGK AEGADCLLDG TDFTVAGYES
GNWVGPTMFT NVTTDMSIYK EEIFGPVLCC MEADNLDDAI ELVNNSPYGN GTSIFTASGG
AARKYQHEIE VGQVGINVPI PVPLPFFSFT GWKGSFYGDQ HAYGKQAVRF CTETKTITTR
WFDSEAVSGP NMSIDLK
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