| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1326 |
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| Symbol | |
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| ID | 4278000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1579866 |
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| End bp | 1580351 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134101 |
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| Product | ferredoxin-type protein NapF |
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| Protein accession | YP_750017 |
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| Protein GI | 114562504 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog |
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| TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCAAG GTATTAATCA AAGTCGTCGT AATCTATTTA GTCGCAGAAA ATCCAATGTC
ACCCGCCCGC CTTGGAGCAA AACGGATCAA GAGTTTACTG ACAATTGCAC ACGCTGTGAC
AAGTGTATTA CCGCCTGCGA AACCCAAATA ATTAAACGCG GTGAAGGTGG TTTTCCTGAA
ATAGATTTCA CTAAAGATGA ATGCACCTTC TGTAAGCAAT GCGTTGATGT GTGCCCAGAG
CCTGTATTTG ATCGCGACCA ATCCTTACCT TGGTCAATTA CGGCTGCGAT AAAAGACAAC
TGTTTAACCC ATGAAGGGGT TTGGTGTCAG AGCTGTAAAG ATGCCTGCGA CCCACGCGCA
ATTAGCTTTA TCATGGCTGT AGGCCAAGTG CCTAAACCCG TGATAGATAC TGATGCCTGT
ACTGGTTGTG GTGCTTGCGT ATCTCCTTGC CCTGCTGATG CGATACTTAT AGGTCATCCA
AACTAA
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| Protein sequence | MNQGINQSRR NLFSRRKSNV TRPPWSKTDQ EFTDNCTRCD KCITACETQI IKRGEGGFPE
IDFTKDECTF CKQCVDVCPE PVFDRDQSLP WSITAAIKDN CLTHEGVWCQ SCKDACDPRA
ISFIMAVGQV PKPVIDTDAC TGCGACVSPC PADAILIGHP N
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