Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1319 |
Symbol | |
ID | 4277381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1573973 |
End bp | 1575049 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134094 |
Product | glucan endo-1,3-beta-D-glucosidase |
Protein accession | YP_750010 |
Protein GI | 114562497 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATC TCAATAAACA TCATTCATTT GTATCCAGCT TAACCGCGTT AACTTTGTCG GTCATAGTTC TGTCTGGCTG TAGTGCTGAT GATGCAACAG AACAAGCAAC AGATACCGTG ATAACCAATA TCGAAGCTTC AGGTTGGCAA CTGGTTTGGC AAGATGAGTT TGAGGGTAAC CAAATAGACA CAACCAAGTG GAGCTTTGCT GTTGACTGTT ACGGTGGCGG CAATGATGAG GCTCAGTGCT ATACCGCACG GTCTAAAAAT GCTGCAGTTA GTGGTGGTCT TTTATCGATT ACGGCATTAC GAGAAACCTT TTCTGGGCCT GCTGTAAATG ATTCTGATCC AAGCTATGAC GTAAACGATA CATCGAAAAC ATTAGATTAC ACCTCTGCTC GTTTAGTATC GAAAAACAAA GGGGATTGGA AATACGGCCG TTTTGAAATT CGCGCAAAAT TACCACAAGG TCAGGGAACT TGGCCTGCGA TATGGATGTT ACCGACAGAT TGGGTATATG GCCCTTGGGC TGGTTCAGGT GAAATAGACA TTATGGAGGC CGTAAACCTC AAGGTTGTTA CCGACGGTAA GACGCCAGAG TCTGCAGTAC ATGGCACATT ACATTACGGT AAACAATGGC CCAATAATGT TTATACAGGG CAAGGGTATC ATTTACCCAA TGAACTCAAT CCTGCGGATG CCTTTCATGT TTATGCTGTT GAATGGCAGC AAGATGAAAT TCGTTGGTAT GTTGATGATG TTCACTTTGC CACACAACAA TCCTCTGGTT GGTACAGTCA ATATATTGAT GGCAATGGTG ATTTGGTTAA TGCTCCTGAT GATGCACCGT TTAACCAGCC ATTTCATATG CTACTCAATC TTGCCGTAGG TGGAGCATGG GCTGGAACCG TCAATAACAC AGGTATCGAT GAGTCAGTTT TTCCGCAATC GATGTTAGTG GATTACGTGC GTGTATATCA ATGTGCTATT TCGCCGAGTT CGGGAGCAGG TTGTGAGACT ATTGATAATA GTGTTGTACC CGTAACGGGT AAAAAAATGC CTGATATTGT TGAGTGA
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Protein sequence | MQNLNKHHSF VSSLTALTLS VIVLSGCSAD DATEQATDTV ITNIEASGWQ LVWQDEFEGN QIDTTKWSFA VDCYGGGNDE AQCYTARSKN AAVSGGLLSI TALRETFSGP AVNDSDPSYD VNDTSKTLDY TSARLVSKNK GDWKYGRFEI RAKLPQGQGT WPAIWMLPTD WVYGPWAGSG EIDIMEAVNL KVVTDGKTPE SAVHGTLHYG KQWPNNVYTG QGYHLPNELN PADAFHVYAV EWQQDEIRWY VDDVHFATQQ SSGWYSQYID GNGDLVNAPD DAPFNQPFHM LLNLAVGGAW AGTVNNTGID ESVFPQSMLV DYVRVYQCAI SPSSGAGCET IDNSVVPVTG KKMPDIVE
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