| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1319 |
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| Symbol | |
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| ID | 4277381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1573973 |
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| End bp | 1575049 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134094 |
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| Product | glucan endo-1,3-beta-D-glucosidase |
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| Protein accession | YP_750010 |
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| Protein GI | 114562497 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC TCAATAAACA TCATTCATTT GTATCCAGCT TAACCGCGTT AACTTTGTCG
GTCATAGTTC TGTCTGGCTG TAGTGCTGAT GATGCAACAG AACAAGCAAC AGATACCGTG
ATAACCAATA TCGAAGCTTC AGGTTGGCAA CTGGTTTGGC AAGATGAGTT TGAGGGTAAC
CAAATAGACA CAACCAAGTG GAGCTTTGCT GTTGACTGTT ACGGTGGCGG CAATGATGAG
GCTCAGTGCT ATACCGCACG GTCTAAAAAT GCTGCAGTTA GTGGTGGTCT TTTATCGATT
ACGGCATTAC GAGAAACCTT TTCTGGGCCT GCTGTAAATG ATTCTGATCC AAGCTATGAC
GTAAACGATA CATCGAAAAC ATTAGATTAC ACCTCTGCTC GTTTAGTATC GAAAAACAAA
GGGGATTGGA AATACGGCCG TTTTGAAATT CGCGCAAAAT TACCACAAGG TCAGGGAACT
TGGCCTGCGA TATGGATGTT ACCGACAGAT TGGGTATATG GCCCTTGGGC TGGTTCAGGT
GAAATAGACA TTATGGAGGC CGTAAACCTC AAGGTTGTTA CCGACGGTAA GACGCCAGAG
TCTGCAGTAC ATGGCACATT ACATTACGGT AAACAATGGC CCAATAATGT TTATACAGGG
CAAGGGTATC ATTTACCCAA TGAACTCAAT CCTGCGGATG CCTTTCATGT TTATGCTGTT
GAATGGCAGC AAGATGAAAT TCGTTGGTAT GTTGATGATG TTCACTTTGC CACACAACAA
TCCTCTGGTT GGTACAGTCA ATATATTGAT GGCAATGGTG ATTTGGTTAA TGCTCCTGAT
GATGCACCGT TTAACCAGCC ATTTCATATG CTACTCAATC TTGCCGTAGG TGGAGCATGG
GCTGGAACCG TCAATAACAC AGGTATCGAT GAGTCAGTTT TTCCGCAATC GATGTTAGTG
GATTACGTGC GTGTATATCA ATGTGCTATT TCGCCGAGTT CGGGAGCAGG TTGTGAGACT
ATTGATAATA GTGTTGTACC CGTAACGGGT AAAAAAATGC CTGATATTGT TGAGTGA
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| Protein sequence | MQNLNKHHSF VSSLTALTLS VIVLSGCSAD DATEQATDTV ITNIEASGWQ LVWQDEFEGN
QIDTTKWSFA VDCYGGGNDE AQCYTARSKN AAVSGGLLSI TALRETFSGP AVNDSDPSYD
VNDTSKTLDY TSARLVSKNK GDWKYGRFEI RAKLPQGQGT WPAIWMLPTD WVYGPWAGSG
EIDIMEAVNL KVVTDGKTPE SAVHGTLHYG KQWPNNVYTG QGYHLPNELN PADAFHVYAV
EWQQDEIRWY VDDVHFATQQ SSGWYSQYID GNGDLVNAPD DAPFNQPFHM LLNLAVGGAW
AGTVNNTGID ESVFPQSMLV DYVRVYQCAI SPSSGAGCET IDNSVVPVTG KKMPDIVE
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