Gene Sfri_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1311 
Symbol 
ID4277373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1559524 
End bp1560246 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID638134086 
ProductSapC family protein 
Protein accessionYP_750002 
Protein GI114562489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC ATGTATTACT AAACAGCATT GAACATAAAG ACGTAAAAGT GATGACTCAT 
CGCTCTGCTG CACTAGGCGA TAACCTTTGG TACAGCGTGA CATTCCCGCA AGAATTTCGC 
AGCGTGCAAG CCCACTATCC TATCTTTTTT CATAAAGATA CTGCCACAGG CCAATTTTAC 
GCGGTGGCAC TTTTTGGTTT TCAGCAGAAT GACAACGTGT TTTTAAGCGA TCAAGGTTGG 
AGCGCATCAT ACGTGCCGCT TACTGTGCGT CGCCAACCTT TTCTAATTGG CCAACAAACC 
GTACTAGAAG ATGGTGTAGA ACGTCAGCAA CGCGTTATTC ATGTGGACTT AGACCACCCT 
AGAGTCAGCG AAACCGAGGG TGAAGCCTTG TTTTTACCTT ACGGTGGTAA CACCCCATTA 
CTCGATGAAG TCGGCGAAAT TCTCGAGGTC ATCCATCATG GTTTACAAGA TGGTCAACGC 
TTTGTCGATG CCTTGATTGA ACATCAATTG CTGGAATCCT TCACTTTAGA TATTGAGTTA 
GACAACGGTC AAAAAAATCA GATGATCGGT TTTTATACCA TCAATGAAGA AACCTTAGCC 
GGGTTGTCTG CTGATGCATT AGCAAAGCTG CACCAGCAAG GTTACTTGCA AGCCATTTAC 
ATGACATTAG CCTCGCAAAG CAATGTACGA GACTTACTTA ACCTCAAGAA TGCTCAAGGT 
TAA
 
Protein sequence
MSQHVLLNSI EHKDVKVMTH RSAALGDNLW YSVTFPQEFR SVQAHYPIFF HKDTATGQFY 
AVALFGFQQN DNVFLSDQGW SASYVPLTVR RQPFLIGQQT VLEDGVERQQ RVIHVDLDHP 
RVSETEGEAL FLPYGGNTPL LDEVGEILEV IHHGLQDGQR FVDALIEHQL LESFTLDIEL 
DNGQKNQMIG FYTINEETLA GLSADALAKL HQQGYLQAIY MTLASQSNVR DLLNLKNAQG