Gene Sfri_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1305 
Symbol 
ID4278503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1552114 
End bp1552728 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content44% 
IMG OID638134080 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_749996 
Protein GI114562483 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTAC AGCAAGTTAT TGCATTATTT TTCACTATGT TAATTTTGGC GATACTGCCG 
GGTCCGGCTG TATTTGCCGT GGTATCAAGA GCATTTTCAA ATGGGTTTAA GCATGGCGCA 
TTTATTACCC TTGGCGTGCT GATGGGAGAT TTTGCTTATA TCCTATTAGC CTTGTTCGGT 
TTGGCCGCCA TTGCCAATGC CATGGGCCCT GCTTTCGAGC TGATAAAGTA CGCCAGTGCG 
CTTTATTTAT GCTGGTTAGG TTTCAGTATG TTGCGTGCAA CCGCCAAAGG TGTTCAATTA 
GCGACAATAC CGAAAGTGAG CCAATTTAAA AATTTAATCA CGGGGCTGCT TATTGCCGTG 
GGCAACCCAA AAGCGTTGAT ATTTTACGTC AGCTTTTTTC CTGCTTTTGT GCCAATGGCC 
CATGTAGACC TTACCGATGT GATGATCATA CTCGCCACAG CCACCTTGGC ATTTGGTTCC 
GTTAATCTCA CTTATGCTTA TTTGGCGTCA AGTGCAAAAC AGGTATTTAC CTCCCCTAAA 
GCGGCAACGA TAATGAATCG AACTGCAGGC AGTATTATGT TGATTGCTGG CATATTGATC 
GCCATAAATA TATAG
 
Protein sequence
MILQQVIALF FTMLILAILP GPAVFAVVSR AFSNGFKHGA FITLGVLMGD FAYILLALFG 
LAAIANAMGP AFELIKYASA LYLCWLGFSM LRATAKGVQL ATIPKVSQFK NLITGLLIAV 
GNPKALIFYV SFFPAFVPMA HVDLTDVMII LATATLAFGS VNLTYAYLAS SAKQVFTSPK 
AATIMNRTAG SIMLIAGILI AINI