| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1299 |
|---|
| Symbol | |
|---|
| ID | 4278497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1541135 |
|---|
| End bp | 1542259 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638134074 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_749990 |
|---|
| Protein GI | 114562477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCAT TTACACGTTT TTTTTCGGTG ATGAAAGGTG GATTATTACT GCTAATGTTG
CTGTTCAGTC AGAGCAGTTT AGCCCATCAA ATGAGCACCA GTTATTTGTC TGTTCATTTA
GATAAATACG GACAAATTCA AGGCGATTGG CAAGTGCGCT TTTTTGACAT AAACCAGGTT
GTCCCTATTG ATGATAACCA AGATGGCGAG CTTGCGTGGG GGGAGCTGCA AGCTCATCAA
ATTGCGATAG TAGATTATTT ACGTTCATCT TTGGCAATCA GCCGAGAGCA AGATTGTCCA
CTGAGTTTTA ACCCAACGCA GCAAGTTGAC CAGCATTTTA GTGAAGGTTA TCTAGTCAGT
TCATTTCAGG CTGAATGTGA TAGCCCCGGA GTGTTGACCA TTAATTATCA AGCTTTCTTC
AATATAGATA CTGATCATAA AGTTATTACC ACCATTGCCA CGCCCGATCA TCAATACACG
CGAGTGATCA GTAACGATAA CCCGATCATA TTGATTAATT TAGCTGAAAG TCAGTTCAGC
GATACATTTA CTGAATATGT TTACCAAGGT GTAATTCATA TTTGGAAGGG CACTGATCAT
ATCTTATTTT TATTAGCGTT GTTGTTAACC TGCGTATTGG TGCGTGAACA ACAGAAATGG
CACGCGATAG ATAAGCCTAA GCAAATATTT AAAGATACCG CGTGGATTAT TACTGCCTTT
ACTTTGGCAC ATTCGGTAAC GTTAACCGCC ACCGCATTGG GGCTTATTAA TTTTAGTAGT
CACTGGGTTG AGCTGGGCAT TGCATTGTCG GTATTGTTTG CGGCACTAAA TAATGTGTGG
CCGATTGTAT TGCGTTTAGG TTGGATTACG TTTGCGTTTG GTTTGTTACA CGGCATGGGA
TTTGCCGGAG TATTAGGCGA ACTTGGCTTG CCTGAAAATC AAAAACTATT AGCGATTCTT
GCGTTTAATG TTGGCGTTGA AATCGGCCAG TTGGCGATTT TAGCGCTAGT GCTGCCTGTA
TTGATGTTTC TACGCCATAC ACTTTGGTAT CGACATTGGG GCATGCAGCT CGGTTCAATT
GCGATTGGGC TCATGGCGAT TCAGTGGTCT GTAGAACGTT TTTAG
|
|---|
| Protein sequence | MKAFTRFFSV MKGGLLLLML LFSQSSLAHQ MSTSYLSVHL DKYGQIQGDW QVRFFDINQV
VPIDDNQDGE LAWGELQAHQ IAIVDYLRSS LAISREQDCP LSFNPTQQVD QHFSEGYLVS
SFQAECDSPG VLTINYQAFF NIDTDHKVIT TIATPDHQYT RVISNDNPII LINLAESQFS
DTFTEYVYQG VIHIWKGTDH ILFLLALLLT CVLVREQQKW HAIDKPKQIF KDTAWIITAF
TLAHSVTLTA TALGLINFSS HWVELGIALS VLFAALNNVW PIVLRLGWIT FAFGLLHGMG
FAGVLGELGL PENQKLLAIL AFNVGVEIGQ LAILALVLPV LMFLRHTLWY RHWGMQLGSI
AIGLMAIQWS VERF
|
|---|
| |