| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1294 |
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| Symbol | |
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| ID | 4278492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1536058 |
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| End bp | 1536594 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134069 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_749985 |
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| Protein GI | 114562472 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.761686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAG ACACATTACT TAACTTATTA AGTGCTAGTG CAGATGGAGA TAAACAAGCG
TTTGCTGATT TATATCAATC TACCAGTGGC CAGTTATTCG CGGTTAGTTT AAAAATGCTC
GGTCGACGTG AGTTAGCCGA AGAGGTACTG CAAGAAGCCT ACGTAAAAAT TTGGCATAAC
GCGACAGAAT ATCAACACGG AAAAGGATCG GTTCTCACGT GGATGATCAG TATTGTTCGT
TACCGAGCCT TAGACATGTT GCGTTATCAA AAGGTCAGAA AGGAAGATCC ACTTGAAGAT
GGCCAAGAAG CCATTTTTGA AGAGCATATC AATGATGACG GGCCTCAGGT TCATAAAAAT
AAACTCGACC AGTGCATGGG AGAACTCGAG CCTCAGCAGA AACAAGCAAT TCATCTCGCT
TACTATAATG GTTTATCGCA TCACGAAGTT GTGGGGCACT TAGATTTACC ATTAGGCACT
ATTAAGAGTT GGATCCGTCG TGGTTTACAA CAATTACAGA GGTGTTTATC GTTATGA
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| Protein sequence | MDQDTLLNLL SASADGDKQA FADLYQSTSG QLFAVSLKML GRRELAEEVL QEAYVKIWHN
ATEYQHGKGS VLTWMISIVR YRALDMLRYQ KVRKEDPLED GQEAIFEEHI NDDGPQVHKN
KLDQCMGELE PQQKQAIHLA YYNGLSHHEV VGHLDLPLGT IKSWIRRGLQ QLQRCLSL
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