| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1293 |
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| Symbol | |
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| ID | 4278491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1533923 |
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| End bp | 1535875 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134068 |
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| Product | potassium efflux system protein |
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| Protein accession | YP_749984 |
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| Protein GI | 114562471 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACA GCATTTTTAT CCATATTTTG TTGATGCTTG TGATTGCTAT TGTGGCGATT
GCATTGTTAC GTCGACTCGG CTTACCGGCC ATTCTAGCTT ATTTACTCAC CGGGGTTGTC
AGTGGCCCCA GCGGTTTTCA TTGGTTTACC CAATTACAAA TGCAATCAGT GGCAGAGTTA
GGCGTAGTGC TACTGATGTT TACCTTAGGA CTGGAGTTTT CGGTACCAAG GTTGTGGGCA
ATGCGCCGAA CCGTTTTTGG TCTGGGTAGC GCCCAAATGC TGGTAACGGC CTTTGTGGCA
GGCGGTATAG CCATGTTGGT TGGGCAAAAC TTAGTGGCAG CGGTGGTGAT TGGTTCGGCT
ATTGCGTTGT CGTCAACGGC CATTGTGTTG AAGCTGCTTA ATGAACAAAA CTGGTTAAGG
CGCAGGCACG GCGAGCTGTC GGTCAGTGTG TTGTTATTTC AAGATCTAGC GGTGGTGCCG
CTATTGATTT TAATGCCACT ACTCGCGAAA GGCGGCGCTG AAATGAGCTT CAACAGTATC
GCGTGGGGAT TACTTACCGG TATTTTGGCA TTTCTAGGGT TAATGTCATT TGGTAAATGG
ATATTGCCAC GTATTTTTGA CGAAGTGGCA CGATCACGTT CAAATGAGTT ATTTGTACTG
TCGACCTTAG TGGTGGCTTT GGTGACTGGC GCGTTTACCC AATGGCTTGG ATTGTCGATG
GCATTAGGAG CATTTATTGC TGGGATGTTG CTTGGCGAAA GCCAGTATCG ACGCCAGTTA
GAGGCTGACA TCAGGCCATT TCGTGATTTA TTAATGGGTT TGTTTTTTAT TTCCATCGGC
ATGCTGCTGG ATTTCAATCT AGTGATGCAA TATTGGTGGC AAGTATTATT GATTTTGGCT
GGGGTGGTAC TCACCAAAAT ATTAATCGTG CACGGTTTGC TCAAGCTTGT GGGTGAAAAT
ACTAAGGTAT CACTCAGTAC CGCAATCAGT TTGGGTCAAG TCGGTGAGTT TAGTTTTGTG
TTACTGGCAT TAGCAGTTAA TTATCAATTA CTCGATACCG AAGTGAGCAC TGTGTTAGTG
GCCGTAGCGG TGATCTCTAT GTCAATGGCG CCTTGGCTTA TTCGCCACAG TGTTGATATT
GCCAAAAAGG TTAGCGGCAA TAAGCTGCCA CCTAAAAATG AACCGATTGA AATTGTATTG
CCTCATGCTG ATGAAAGTGA TGTGGTACTG ATTTTAGGTT ACGGCCGAGT AGGGCAAACG
ATTGCACGCT TTTTGAAAAC AGAAGCTGTG CCTTATATGG TGCTTGATTT AGACCCCACC
AGAGTGACAG AAGCGAGAGC CGCAGGCGAA AATATTCATT TTGGTGATGC TTGCAGAATG
GCGCTATTGA AGAAGATGGG CATTCGCCAA GCGAGCTTAG TGGTGGTGAC ATTTTGCGAA
CCAAGGCAAT CTGAAGAGTG TTTAGCAGTG GCGCGTAAAC TGGCTCCCGA TGTAAAAATA
TTGGTGCGCA CTCGCGATGA TGCCAACTTA CATGAGCTTA AAGAAGCGGG GGCGACTCAA
GTTATCCCTG AATCACTTGA GGGCAGCTTA ATGTTGGTGT CGCAAGTGTT GTTTAAATGT
GGTGTCCCCT TAGCGCGGAT TATTAAACGC TTGGAATCTG AACGACGTAA TCATTACCAA
TATTTACACG GTTTCTTTTC AGGCACCGAA ACTGATTTCA CCTTAGATTT ACTCCATGCC
GTGTCACTAG CTTCAGGCGC TAGTGCGGTG GGGAAAACCG TTGCAGACAT TCCATGGCAA
GCTTTGGATG TTGAGCTTAG AGCTGTGCGG CGTAAAGGCG AGGAAATCGA TCCCCCTCCA
CCGGAGTGGA TATTAAGGCG TAACGATATT TTAATGCTGG TGGGTAAACC GCGCAGTATT
GAGAAAGCTG AAGAGTATTT ACTGCAAGGT TAA
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| Protein sequence | MEHSIFIHIL LMLVIAIVAI ALLRRLGLPA ILAYLLTGVV SGPSGFHWFT QLQMQSVAEL
GVVLLMFTLG LEFSVPRLWA MRRTVFGLGS AQMLVTAFVA GGIAMLVGQN LVAAVVIGSA
IALSSTAIVL KLLNEQNWLR RRHGELSVSV LLFQDLAVVP LLILMPLLAK GGAEMSFNSI
AWGLLTGILA FLGLMSFGKW ILPRIFDEVA RSRSNELFVL STLVVALVTG AFTQWLGLSM
ALGAFIAGML LGESQYRRQL EADIRPFRDL LMGLFFISIG MLLDFNLVMQ YWWQVLLILA
GVVLTKILIV HGLLKLVGEN TKVSLSTAIS LGQVGEFSFV LLALAVNYQL LDTEVSTVLV
AVAVISMSMA PWLIRHSVDI AKKVSGNKLP PKNEPIEIVL PHADESDVVL ILGYGRVGQT
IARFLKTEAV PYMVLDLDPT RVTEARAAGE NIHFGDACRM ALLKKMGIRQ ASLVVVTFCE
PRQSEECLAV ARKLAPDVKI LVRTRDDANL HELKEAGATQ VIPESLEGSL MLVSQVLFKC
GVPLARIIKR LESERRNHYQ YLHGFFSGTE TDFTLDLLHA VSLASGASAV GKTVADIPWQ
ALDVELRAVR RKGEEIDPPP PEWILRRNDI LMLVGKPRSI EKAEEYLLQG
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