| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1289 |
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| Symbol | |
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| ID | 4278487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1528484 |
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| End bp | 1529527 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134064 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_749980 |
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| Protein GI | 114562467 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.432332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT ATAATAACTC ACATCCATAC TACTGTGGTA TCGATTTACA TGCACGTTTA
CTTTATGTCT GTATCATTGA TTCTAAAGGG GAAGTTGTAG CTCATAACAA GATAGGTGCC
AGTAAAGATG ACTTATTACT CATTCTAGAA CCTTATATCG GCAATGTAAT TGTCGGGGTT
GAGTGCATGC ATTGCTGGTA TTGGGTGTCA GACTGGTGTG CTGAACTTGG GATTGATTTT
ATCTTAGGTC ATGCGCTTTA TATGAAGGCG ATTCACGGTG GTAAAACCAA AAATGATAAA
GTCGATTCCT TTAAAATTTC CACACTACTG CGTGGTGGTA ACTTTCCAAT AGCTTATGAT
TATCCAAGTG AAATGCGCGC AGCTCGTGAT CTACTGCGCC GAAGAATGAA GATTGTCCGT
CACGGGGCCA TGCTCAAAGG TCATGTGGTT AACACCAACA GCCAATACAA TTTACCTGCC
ACTGAACTTA ACCTTAAAAA CATCTCTGCA AGACAAAAAC TTCGCGAGCA ATATCAAGAC
ATTATCGTCC AACGCAACAT TGATTTAGAC ATGGCACTAC TTGATTGTTA TGCAAAGGAA
CTCGCACAGG TTGAATGGTT CATTGAAAAA CAGGCCAAAA ACCATAATCC CGTCTATTTA
GAATTACTGA AAACAGTACC AGGTATTGGC AAGATTTTGT CACTGACAAT CCTCTATGAA
ATCGGTGATA TCAGCCGATT TGAATCAGTA CAAAAGTTTG CTTCATACTC TCGATTGGTC
AAATGCAAAG CAGAATCAGC GGGTAAAACC TATGGCACCA ATGGCAATAA AATCGGTAAT
GCTCATTTGA AATGGGCATT CTCAGAAGCA GCGGTGCTGT ACCTGCGAGG CAATGACAAA
GCACGTAACT ACCTTAATCG ATTACAAAAA CGAATGAGTA AAGCAAAGGC GTTGTCTGCA
CTGGCACATA AGCTTGGTCG CTGCGTCTAT TTCATGCTGA AGAACAAAAC GGTGTTTGAT
GAACAACGAT TCTTAAAAGG ATAA
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| Protein sequence | MRFYNNSHPY YCGIDLHARL LYVCIIDSKG EVVAHNKIGA SKDDLLLILE PYIGNVIVGV
ECMHCWYWVS DWCAELGIDF ILGHALYMKA IHGGKTKNDK VDSFKISTLL RGGNFPIAYD
YPSEMRAARD LLRRRMKIVR HGAMLKGHVV NTNSQYNLPA TELNLKNISA RQKLREQYQD
IIVQRNIDLD MALLDCYAKE LAQVEWFIEK QAKNHNPVYL ELLKTVPGIG KILSLTILYE
IGDISRFESV QKFASYSRLV KCKAESAGKT YGTNGNKIGN AHLKWAFSEA AVLYLRGNDK
ARNYLNRLQK RMSKAKALSA LAHKLGRCVY FMLKNKTVFD EQRFLKG
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