| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1287 |
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| Symbol | |
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| ID | 4278398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1524300 |
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| End bp | 1525889 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134062 |
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| Product | peptidase M28 |
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| Protein accession | YP_749978 |
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| Protein GI | 114562465 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.132857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCTG TGAATACCTT TCGTTTATTA GCCGTGTTTG GTGTGTTGCT TCTGCCAAGC
GTAAACGCTA CCCCATTTCA ATTTGATCAA AAAACCTATC GTCAAGATGT GCAAACCTTA
GCAAGTGATG AATTTGAAGG CCGTGGGCCG TTATCTCATG GTGAAAAACT GACGGTTGAG
TATTTAGAAA ACGCCTACAA AGCAATGGGA CTCGCTCCAG GTTTTGGTGA CAGTTATCGT
CAAGCTGTGC CAATGGCTAA AATTACTGCT GATCAAACAA TGCAGCTGAG TATGGGCGAT
TTAGTGTTTA ACAACGGCAC TGACTTCACC GCACGTACTG AACAAGTTCA GCCTCAAGTG
AGTGTAGATA ACAGCGATGT AGTGTTTGTT GGCTATGGTA TTAATGCGCC GGAATATCAA
TGGAATGATT ACGCCAACAT TGACGTTAAA GGCAAAACCG TGATTATGCT GGTCAATGAC
CCAGGCTTTG CGACTCAAGA TCCTGCCATC TTTAAAGGCA ATGCCATGAC CTATTATGGC
CGTTGGACTT ATAAGTATGA AGAAGCAGCA AGGCAGGGCG CCAAAGCGGT GTTTATTGTC
CATGAAACCG CACCCGCAGC CTACGGTTGG AACGTCGTTG AAAACAGCAA CACTAATACC
AAATACACTT TAGTTGATGA CCACAAAAAC CAATCACACA TTGGCGTCAT GGGCTGGATC
CAACACCAAA CCGCGCAAAA AGTGTTTCAA GCAGCAGGCT TAGACTTTGA TAAAGTAAAA
CTCACCGCAG CAAAAGCAGG TTTTAAGTCT ATAGCACTTA AACTCAAAGC CAATTTAGCA
GTAAAAAATA CCATTGAATT AGCCACATCC TATAACGTAG CAGGGCTGAT ACCAGGTACC
AGCCAAGCCG ACGAATGGTT GGTCATGCAT GCCCATTGGG ATCATTTAGG TAAAACCGTG
CAAGACGGTA AAACAGTAAT TTTAAACGGC GCTGTCGACA ATGCCTCTGG CGTGGCAGGT
GTGTTACAAC TTGCTAGTCA TTTTAAAGCA CAAAACAAAG CACCTAAACG CTCTATTCTG
TTTACTGCAT TTACCGCCGA AGAAACCGGC CTTATTGGCG CGCAATACTT TGCTGCCAAT
CCTCCGGTAC CGACTAAACA ACTGGTATCG TTTTTAAATA TAGATGGCAT GAATGTAGGC
AAAGGTGTTA ATTACATCCT GCGTTATGGC CAAGGCGTAT CAGAACTTGA AACCTATTTA
GATGATGCCG CCAAAGCACA AGGCCGCACC GTAAAGGCTG ATCCTCGTCC ACAAAATGGT
TTAATGTTCC GTTCAGACCA TTTTGCTTTA GCACAACAAG GCGTCCCCGG GTTAATGTTC
ATGAGCTTAG GCGACACCGA CCCAGACTAC ATTGCCCATA AGTACCATCA AGGCGCAGAC
GATTACGATG CCAGCTGGAA TTTAGGCGGG GTAGAGCAAG ATCTAGCTTT AATCAGCGAC
ATCATTGAAA AGCTAGCCAA CAACAACGAC TGGCCAAAAT GGATTGAAGA TTCAGACTTT
AAAAAGCGTC GAGCGACGGA CGGTAAATAA
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| Protein sequence | MLSVNTFRLL AVFGVLLLPS VNATPFQFDQ KTYRQDVQTL ASDEFEGRGP LSHGEKLTVE
YLENAYKAMG LAPGFGDSYR QAVPMAKITA DQTMQLSMGD LVFNNGTDFT ARTEQVQPQV
SVDNSDVVFV GYGINAPEYQ WNDYANIDVK GKTVIMLVND PGFATQDPAI FKGNAMTYYG
RWTYKYEEAA RQGAKAVFIV HETAPAAYGW NVVENSNTNT KYTLVDDHKN QSHIGVMGWI
QHQTAQKVFQ AAGLDFDKVK LTAAKAGFKS IALKLKANLA VKNTIELATS YNVAGLIPGT
SQADEWLVMH AHWDHLGKTV QDGKTVILNG AVDNASGVAG VLQLASHFKA QNKAPKRSIL
FTAFTAEETG LIGAQYFAAN PPVPTKQLVS FLNIDGMNVG KGVNYILRYG QGVSELETYL
DDAAKAQGRT VKADPRPQNG LMFRSDHFAL AQQGVPGLMF MSLGDTDPDY IAHKYHQGAD
DYDASWNLGG VEQDLALISD IIEKLANNND WPKWIEDSDF KKRRATDGK
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