Gene Sfri_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1284 
SymbolrnhB 
ID4278395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1518334 
End bp1518972 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID638134059 
Productribonuclease HII 
Protein accessionYP_749975 
Protein GI114562462 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.103887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAT TATCGGTTGT GATAAAAGAT ATTACCCCTG AACAAGTAGC CATTATTTCA 
CAAGGGCTTG TTGCTGGTGT TGATGAAGTC GGGCGTGGTC CACTGATTGG TGATGTGGTC 
ACCGCCGCGG TGATATTAGA TCCGAATAAA CCGATTGTTG GCCTCAATGA CTCTAAGAAG 
CTCAGCGAGA AACGTCGTAA TGCTTTGTAT CAACAGATTA TGGATAACGC GCTAAGTGTC 
AGTGTTGGCC GTGCTAGCCC TGCTGAAATC GATGAGCTGA ATATTTTGCA TGCCACCATG 
CTGGCCATGC AGCGCGCAGT AGCTGGGTTA TCCATTTTGC CTGAACGAGT ACTGGTTGAT 
GGCAATCGGG TACCGGATTT TGGTATTGCT AGTCATGCGA TAATTAAAGG CGACGGCTTA 
GTGGCAGCGA TTAGTGCAGC ATCCATTATT GCTAAAGTCA CTCGTGATGC CGAAATGGAT 
ACGTTAGACA GTCAATATCC ACAGTATGGC TTTGCTAAAC ATAAAGGTTA TCCAACCAAA 
GCACACTTTG AAGCGCTAGC CTTATATGGT GTGTTGCCTG ATCATCGTAA AAGTTTTAAA 
CCTGTTGCGG ACCGCATTTT ACTCCAAAAT ACATTTTGA
 
Protein sequence
MSTLSVVIKD ITPEQVAIIS QGLVAGVDEV GRGPLIGDVV TAAVILDPNK PIVGLNDSKK 
LSEKRRNALY QQIMDNALSV SVGRASPAEI DELNILHATM LAMQRAVAGL SILPERVLVD 
GNRVPDFGIA SHAIIKGDGL VAAISAASII AKVTRDAEMD TLDSQYPQYG FAKHKGYPTK 
AHFEALALYG VLPDHRKSFK PVADRILLQN TF