Gene Sfri_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1280 
SymbollpxD 
ID4278391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1514873 
End bp1515895 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content44% 
IMG OID638134055 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_749971 
Protein GI114562458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000197403 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGA CTTTAAAAGA GCTTAGCCAA CTATTGGGTG CAACGATTAA AGGTGACGCA 
ACACTGGAAA TAACCAGTGT CGCTACCCTT GAAGATGCAA CCCAAGGCCA ACTCTCTTTT 
TTAGCCAATA GTAAGTACCG TGCTCAGCTT GAGGCAACTC AAGCTAGTGC GGTATTGCTG 
AGCGAAAAAG AAGCAAGTTG TTATCATGGT AATGCCCTTA TTGTTAGCGA TCCTTACGTA 
GGATTTGCTC GAGTAGCGCA ATTACTAGAT ACCACCCCAA AAGAAACGCC TGGTATTCAT 
CCTTCAGCTC AAATAGATAC ATCAGCCATT TTAGGTGACG GTGCCGCTAT TGGTGCAAAT 
GCGGTGATAG GTGCGAATGT TATTTTGGGT GAAAATGTTC AAATAGGTCC AGGTTGTGTG 
GTGGGTGAAT CCAGTATTAT TGGTTCAAAC ACGCGTCTTT GGGCTAATGT AAGTGTTTAT 
CATAATGTCC ATATTGGTCA TGATTGCATC GTCCATTCAG GGACGGTAAT TGGCTCTGAT 
GGTTTTGGTT ATGCCAATGA ACGCGGTAAC TGGGTTAAAA TTCCACAAAC AGGCGGCGTT 
CGGATTGGTA ATCATGTTGA AATTGGCGCA TGTACTTCTA TTGACCGTGG TGCGTTGTCG 
CATACCGAGA TCCACGATGG TGTGATTATC GACAACCAAG TTCAAATTGC TCATAATGTC 
GTTATCGGCC AAAATACCGC AATGGCTGGT GGCTCTATTA TTGCTGGAAG TTCTACCATT 
GGTAAATATT GTATTATCGG TGGTGGTAGT GCTGTTGCTG GACACCTTAG TGTCGCTGAT 
GGTGTACACA TATCAGGCGG AACGAACGTG ACCAGTGTTA TCCGTGAAAA AGGTGTGTAT 
TCGTCCGCAA CCATCGCAAT GGAAAACAAA TTATGGCGTC GAAACACTGT TCGTTTCCGT 
CAATTAGATG AATTATTTAG CCGAGTTAAA ACCCTCGAGA AAAGTGCTAA GGGCTCAGAA 
TAA
 
Protein sequence
MKVTLKELSQ LLGATIKGDA TLEITSVATL EDATQGQLSF LANSKYRAQL EATQASAVLL 
SEKEASCYHG NALIVSDPYV GFARVAQLLD TTPKETPGIH PSAQIDTSAI LGDGAAIGAN 
AVIGANVILG ENVQIGPGCV VGESSIIGSN TRLWANVSVY HNVHIGHDCI VHSGTVIGSD 
GFGYANERGN WVKIPQTGGV RIGNHVEIGA CTSIDRGALS HTEIHDGVII DNQVQIAHNV 
VIGQNTAMAG GSIIAGSSTI GKYCIIGGGS AVAGHLSVAD GVHISGGTNV TSVIREKGVY 
SSATIAMENK LWRRNTVRFR QLDELFSRVK TLEKSAKGSE