| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1279 |
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| Symbol | |
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| ID | 4278390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1514370 |
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| End bp | 1514867 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134054 |
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| Product | outer membrane chaperone Skp (OmpH) |
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| Protein accession | YP_749970 |
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| Protein GI | 114562457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000429908 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAATC GCGCATTAAT TACATTGGCA TTGTTTGCTA CCCCTATGCT AGCCCAAGCG
GAAAAACTCG CAGTGGTTGA TATGGGTGAA GTGTTCGAGC AGTTGCCACA GCGCGAGCAA
ATTTCTAAAT CATTAAAAGC TGAGTTTGGT GATCGTGTTG CTGAAGTCCA AAAAATGCAG
GAAGAAATGC GTTCTTTGGT TGAAAAGCAA CAACGTGACG GCGCCTTAAT GAGCGATTCA
CAAAAGACTG AATTAGTACG TAAAATGGAA TCATTAAAGT CTGAATTCCA GTTGAAAGGC
AAAGCACTAG ATGAAGACAT GCGTCGTCGT CAAGGTGAAG AGCAAAACAA ACTATTAGTT
CAAGTTCAAA AAGCGATTAA TACCATTGCT GGTAAAGAAA AATACGACAT GGTGCTACAA
CGTGGCGCAG TTATTTTTGT TAAACCAGAA GCTGACATCA GCAGCAAAGT GGTAGAAGCC
TTAAGCAAAG GCAAATAA
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| Protein sequence | MVNRALITLA LFATPMLAQA EKLAVVDMGE VFEQLPQREQ ISKSLKAEFG DRVAEVQKMQ
EEMRSLVEKQ QRDGALMSDS QKTELVRKME SLKSEFQLKG KALDEDMRRR QGEEQNKLLV
QVQKAINTIA GKEKYDMVLQ RGAVIFVKPE ADISSKVVEA LSKGK
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