| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1274 |
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| Symbol | |
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| ID | 4278385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1507509 |
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| End bp | 1508333 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134049 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_749965 |
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| Protein GI | 114562452 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.278229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTA CAGTTGAGTT TGAATCAGAC CCTAAAGCCG ATTCGGAGCA AATGACTTCG
CAATTGTTGC CGGGACAATT ATCTGATGTA GTAAAACAAT CTCTGCCCAA ACATGTTGCG
ATTATTATGG ATGGTAATGG CCGTTGGGCA CAACTGCAGG GTAAAGCTCG GGTTTTCGGT
CATAAAGCCG GTGTTAAAGC TGTGCGCCGT GCGGTAAGTA CTGCAAGTCA ACTTGGTATT
GAATCACTAA CCTTGTTTGC ATTTTCAAGT GAAAATTGGC GCCGACCAGA TAAAGAAGTC
AGTTTGTTGA TGGAATTGTT TTTTACGGTG TTACAACGTG AATTGAAATT GCTCGACAAA
AACCAAGTTA AGCTCAACAT TATTGGTGAT ACCAGCAGGT TTTCTAATCG TTTACAGAAA
CAGATTGCCG GTGCTCAAGA GAAAACAGCA AGCAATACTG GTCTGATATT AAATGTGGCA
GCGAACTATG GCGGACGTTG GGATATCTTA CAAGCTGCAC AAAAATTAGC CGAAAAAGTT
GAAAGTGGCG AAATCACCAG CAGTCAGATG ACCGAAGAAG CATTAAATGA ACATTTGTGC
ATGCAAAACC AGAGCGAAGT TGATTTAATG ATCCGTACAG GCGGTGACTA CCGCATTAGT
AATTTTGTTT TATGGCAGGC CGCTTATGCC GAGTTGGTGT TTACTGACAC CCTATGGCCT
GACTTTGATG AGCTAGCATT TCGTGATGCT ATTGCCATTT TTGCCAGTCG GCAGCGCCGT
TTTGGTTTGA CGGGTAGTCA AATTGAAGAG ATACGCGCAA TATAA
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| Protein sequence | MSSTVEFESD PKADSEQMTS QLLPGQLSDV VKQSLPKHVA IIMDGNGRWA QLQGKARVFG
HKAGVKAVRR AVSTASQLGI ESLTLFAFSS ENWRRPDKEV SLLMELFFTV LQRELKLLDK
NQVKLNIIGD TSRFSNRLQK QIAGAQEKTA SNTGLILNVA ANYGGRWDIL QAAQKLAEKV
ESGEITSSQM TEEALNEHLC MQNQSEVDLM IRTGGDYRIS NFVLWQAAYA ELVFTDTLWP
DFDELAFRDA IAIFASRQRR FGLTGSQIEE IRAI
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