Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1266 |
Symbol | |
ID | 4277398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1497594 |
End bp | 1499489 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638134041 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_749957 |
Protein GI | 114562444 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACAAA AAGCTGATTT TTTCTTAAAA CCTTCAGAAT TACCCAAAAC AGTTGGGTTA TGTTGGGGCA TTCTTAATGA TAGGCTTGAA TTAATTAAGC TGAGTGAACC GTTATACAAA TTGGTCAAAA AACCCATATC AGCCATTCTA AAGCAACCGT TGTCTAATGC TTTTTCAATG CTTACCCATG ATCAAATAGA TCTTACCAAT CATCTTTCTT CACAACTGAT CAATTTTGTT GATGACAACG GTCATGCACT ACAAGCTACA GTTACCCCGA TAGAAGAAAG CAGCGAGCAT TGGTGTATTA CCTTTATAGA AATCGAACTC GATAAAGCAT GGTTATCAGA TTTACATCCT GATTATCATC AAGCGATTCA GTCTAGTGAT GATTGGCTTA ATCAAATCGA AGAAGTGATT AATGCCAGTG GTGATATGGT GTTTGCTATT TCATTAAAAC AGGCACTTTC ATTGACACAA TCTACTGTAG GTTATCTGCA TATATTTGAT GAAAAAAACA ATCAAATTGT GCGAACCACA TGGAGTGAAA ACGTTAGTGA TTATTTTACG ATTGCCAAAC AACAAACGTA TAAAGCTGAT TCAGGTATTT GGGCAGAAAC CATCCAAACC CGTAAATCGA CGGTGCACAA TGAGTTAACC AGTATTTCTG AGAACCGCAC ACAACAACAA GGTTTTTTTG CCTTTAGTAA TCATCTTTGT GTGCCCATTC ATTATCGCAA AAAACTCGTT GGCATTATCG GCGTTGGCAA TCGTGACAAA CCTTATACCC AAGTAGACGC CAAATCGTTA AGTATTTTTG CGACTATTTT GTGGCACAGC GTCGAATTGC CACGCACCAT GAAAGCAGTG TCGAGGCAAT CTAGCATTAT TAAAATGCAA AAAGAAAAGA TGACCCTCAT TTTGGTGCAG TTGATTGGTG CCATTTCAGA AGCGCTAGAA TTAAAAGATG CTTATACCGC GGGGCATCAA AAGTCGGTTG CGCAGTTAAG CTATCTTATT GGCGAGAAAA TGGGCTTAAC ACCTGAAGTA TTGGAAGGAT TAAAATTGGG TTCATTGATC CACGATATCG GTAAATTGGC CATTCCAAGT CAGATTCTAT CTAAACCCTC AAGGTTAAGT GATGCTGAGT TTGGCTTAGT TAAACAGCAC CCTGAGCAAG GTGCGTTAAT CGTTGATGAA GTGGAGTTTC CTTGGCCTAT TAAGCAAATG ATCCTTCAAC ATCATGAGCG CTTAGACGGT TCTGGTTACC CCAAAGGATT AAAAGCGGAT GACATCATAC TTGAGGCTAA GATCATTGCT GTCGCCGACG TTGCTGATTC GATTCTTAGC CATCGTCCTT ATCGACCATC GCTGGGAATG GAAGTGTTAA CCCAAGAGTT ATTAAAAGGC AGAGGTAAAG TCTTCGATGC CGCTGTTGTG GACGCATGTA TTGATATTTT GGCTGTGGAA GACTTCAAAG AAGAAGAGTA TGTTAGCAGT TTGTCATTAG CCCCAGTTGT ATTTTTGGAA GAATATCATA CTCTTGAACA CGCTGAGTCT ATGATGAAGA AAGCTAAAAT GGATGTGGCA GTAGTATTGT CTGAAAAAAA TCGTAACCCA ATAGGCGTGG TTGATAATCA TGTTTTAGCT TTTTGGCACA GTCCATTTTT AAATACCGCA GCAGAACGAG CAGCAGATAG AAGCTTACTG AATAAACGTG TACATCAAGT GATGGTGCAT AAAATGAATA TGATTATCGA TCATACCATT TTGAATGATG CCAAACTGAC GATGGAAAAA ACTAATGCCA GCTATTTAAT CGTCCAGAAT GATAAGCAAC AAGTTATTGG TATGTTGACC TGGCGAATTT TAGCGGCAGC ATTACTCAAT CGATAA
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Protein sequence | MLQKADFFLK PSELPKTVGL CWGILNDRLE LIKLSEPLYK LVKKPISAIL KQPLSNAFSM LTHDQIDLTN HLSSQLINFV DDNGHALQAT VTPIEESSEH WCITFIEIEL DKAWLSDLHP DYHQAIQSSD DWLNQIEEVI NASGDMVFAI SLKQALSLTQ STVGYLHIFD EKNNQIVRTT WSENVSDYFT IAKQQTYKAD SGIWAETIQT RKSTVHNELT SISENRTQQQ GFFAFSNHLC VPIHYRKKLV GIIGVGNRDK PYTQVDAKSL SIFATILWHS VELPRTMKAV SRQSSIIKMQ KEKMTLILVQ LIGAISEALE LKDAYTAGHQ KSVAQLSYLI GEKMGLTPEV LEGLKLGSLI HDIGKLAIPS QILSKPSRLS DAEFGLVKQH PEQGALIVDE VEFPWPIKQM ILQHHERLDG SGYPKGLKAD DIILEAKIIA VADVADSILS HRPYRPSLGM EVLTQELLKG RGKVFDAAVV DACIDILAVE DFKEEEYVSS LSLAPVVFLE EYHTLEHAES MMKKAKMDVA VVLSEKNRNP IGVVDNHVLA FWHSPFLNTA AERAADRSLL NKRVHQVMVH KMNMIIDHTI LNDAKLTMEK TNASYLIVQN DKQQVIGMLT WRILAAALLN R
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