Gene Sfri_1266 details

Gene Information

• Locus tag: Sfri_1266
• ID: 4277398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1497594
• End bp: 1499489
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638134041
• Product: metal dependent phosphohydrolase
• Protein accession: YP_749957
• Protein GI: 114562444
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2206] HD-GYP domain
• TIGRFAM ID: [TIGR00277] uncharacterized domain HDIG

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACAAA AAGCTGATTT TTTCTTAAAA CCTTCAGAAT TACCCAAAAC AGTTGGGTTA 
TGTTGGGGCA TTCTTAATGA TAGGCTTGAA TTAATTAAGC TGAGTGAACC GTTATACAAA 
TTGGTCAAAA AACCCATATC AGCCATTCTA AAGCAACCGT TGTCTAATGC TTTTTCAATG 
CTTACCCATG ATCAAATAGA TCTTACCAAT CATCTTTCTT CACAACTGAT CAATTTTGTT 
GATGACAACG GTCATGCACT ACAAGCTACA GTTACCCCGA TAGAAGAAAG CAGCGAGCAT 
TGGTGTATTA CCTTTATAGA AATCGAACTC GATAAAGCAT GGTTATCAGA TTTACATCCT 
GATTATCATC AAGCGATTCA GTCTAGTGAT GATTGGCTTA ATCAAATCGA AGAAGTGATT 
AATGCCAGTG GTGATATGGT GTTTGCTATT TCATTAAAAC AGGCACTTTC ATTGACACAA 
TCTACTGTAG GTTATCTGCA TATATTTGAT GAAAAAAACA ATCAAATTGT GCGAACCACA 
TGGAGTGAAA ACGTTAGTGA TTATTTTACG ATTGCCAAAC AACAAACGTA TAAAGCTGAT 
TCAGGTATTT GGGCAGAAAC CATCCAAACC CGTAAATCGA CGGTGCACAA TGAGTTAACC 
AGTATTTCTG AGAACCGCAC ACAACAACAA GGTTTTTTTG CCTTTAGTAA TCATCTTTGT 
GTGCCCATTC ATTATCGCAA AAAACTCGTT GGCATTATCG GCGTTGGCAA TCGTGACAAA 
CCTTATACCC AAGTAGACGC CAAATCGTTA AGTATTTTTG CGACTATTTT GTGGCACAGC 
GTCGAATTGC CACGCACCAT GAAAGCAGTG TCGAGGCAAT CTAGCATTAT TAAAATGCAA 
AAAGAAAAGA TGACCCTCAT TTTGGTGCAG TTGATTGGTG CCATTTCAGA AGCGCTAGAA 
TTAAAAGATG CTTATACCGC GGGGCATCAA AAGTCGGTTG CGCAGTTAAG CTATCTTATT 
GGCGAGAAAA TGGGCTTAAC ACCTGAAGTA TTGGAAGGAT TAAAATTGGG TTCATTGATC 
CACGATATCG GTAAATTGGC CATTCCAAGT CAGATTCTAT CTAAACCCTC AAGGTTAAGT 
GATGCTGAGT TTGGCTTAGT TAAACAGCAC CCTGAGCAAG GTGCGTTAAT CGTTGATGAA 
GTGGAGTTTC CTTGGCCTAT TAAGCAAATG ATCCTTCAAC ATCATGAGCG CTTAGACGGT 
TCTGGTTACC CCAAAGGATT AAAAGCGGAT GACATCATAC TTGAGGCTAA GATCATTGCT 
GTCGCCGACG TTGCTGATTC GATTCTTAGC CATCGTCCTT ATCGACCATC GCTGGGAATG 
GAAGTGTTAA CCCAAGAGTT ATTAAAAGGC AGAGGTAAAG TCTTCGATGC CGCTGTTGTG 
GACGCATGTA TTGATATTTT GGCTGTGGAA GACTTCAAAG AAGAAGAGTA TGTTAGCAGT 
TTGTCATTAG CCCCAGTTGT ATTTTTGGAA GAATATCATA CTCTTGAACA CGCTGAGTCT 
ATGATGAAGA AAGCTAAAAT GGATGTGGCA GTAGTATTGT CTGAAAAAAA TCGTAACCCA 
ATAGGCGTGG TTGATAATCA TGTTTTAGCT TTTTGGCACA GTCCATTTTT AAATACCGCA 
GCAGAACGAG CAGCAGATAG AAGCTTACTG AATAAACGTG TACATCAAGT GATGGTGCAT 
AAAATGAATA TGATTATCGA TCATACCATT TTGAATGATG CCAAACTGAC GATGGAAAAA 
ACTAATGCCA GCTATTTAAT CGTCCAGAAT GATAAGCAAC AAGTTATTGG TATGTTGACC 
TGGCGAATTT TAGCGGCAGC ATTACTCAAT CGATAA 

 

Protein sequence

MLQKADFFLK PSELPKTVGL CWGILNDRLE LIKLSEPLYK LVKKPISAIL KQPLSNAFSM 
LTHDQIDLTN HLSSQLINFV DDNGHALQAT VTPIEESSEH WCITFIEIEL DKAWLSDLHP 
DYHQAIQSSD DWLNQIEEVI NASGDMVFAI SLKQALSLTQ STVGYLHIFD EKNNQIVRTT 
WSENVSDYFT IAKQQTYKAD SGIWAETIQT RKSTVHNELT SISENRTQQQ GFFAFSNHLC 
VPIHYRKKLV GIIGVGNRDK PYTQVDAKSL SIFATILWHS VELPRTMKAV SRQSSIIKMQ 
KEKMTLILVQ LIGAISEALE LKDAYTAGHQ KSVAQLSYLI GEKMGLTPEV LEGLKLGSLI 
HDIGKLAIPS QILSKPSRLS DAEFGLVKQH PEQGALIVDE VEFPWPIKQM ILQHHERLDG 
SGYPKGLKAD DIILEAKIIA VADVADSILS HRPYRPSLGM EVLTQELLKG RGKVFDAAVV 
DACIDILAVE DFKEEEYVSS LSLAPVVFLE EYHTLEHAES MMKKAKMDVA VVLSEKNRNP 
IGVVDNHVLA FWHSPFLNTA AERAADRSLL NKRVHQVMVH KMNMIIDHTI LNDAKLTMEK 
TNASYLIVQN DKQQVIGMLT WRILAAALLN R