| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1261 |
|---|
| Symbol | |
|---|
| ID | 4277393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1492826 |
|---|
| End bp | 1493188 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638134036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_749952 |
|---|
| Protein GI | 114562439 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3098] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.185788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATCAT ACTCCGACTT AGCCTTTATA TTGTCGTTCA TGTTTATGCT TTATTTAGCC
AGCCATAATT ATTTAATTAA ATTAGAACAA TTGCTTAAGG AATTTCAGTT GTGGTCTGAT
ACCTCACCTC CGGTATCTGC TTTAACGAGT ACGGCACCAT TTAGCTGCGA TGTAATGGCA
TTTGAGCAAT GGTTGCAGTT TATTTTTATT CCAAAGATGA CCGAGTTAGT TGTGCAACGA
CAGCCTTTGC CGACCAATAT GGCTTTAGCG CCCATGGCTG AGCATGTGTG GCAAGGTATG
CACTATGGGG ATGTTCTGAT TGCTCAATTA CAACAATTTG ATACTTTGCT CAGTCAGCGT
TAA
|
|---|
| Protein sequence | MISYSDLAFI LSFMFMLYLA SHNYLIKLEQ LLKEFQLWSD TSPPVSALTS TAPFSCDVMA
FEQWLQFIFI PKMTELVVQR QPLPTNMALA PMAEHVWQGM HYGDVLIAQL QQFDTLLSQR
|
|---|
| |