| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1257 |
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| Symbol | |
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| ID | 4277389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1488253 |
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| End bp | 1489299 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638134032 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_749948 |
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| Protein GI | 114562435 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAGA TACTCAAAAC AGGCATTGTT AGTTACGGCT ATGCCGCAAA AACGTTTCAT
GCACCATTGA TTAAGGCTGT ACCGGGCCTG CAACTCGCCG CAATATCCTC CAGCAATCCG
GCAAAGGTGC ATATAGACCA ACCTGATTTG CCTGTGTTCT CATCCCCCGG AGAGTTATTT
TCCTGTGCTG ATATCGATTT GGTGGTTATT CCCACTCCCA ACGAGACGCA TTTTCCACTA
GCGGCAGCAG CGCTAGCTGC CGGAAAGCAC GTCGTCTTGG ATAAGCCGTT CACCCTCACT
ACCGATGAAG GTAAAGAGCT TATTAAGCTC GCTCATCAAT GTGATCGACA GCTATCAGTA
TTTCATAATC GCCGTTGGGA TTCCGATTTT CTGACGTTAC AGAAGGTGCT GCGGGAAGGT
TCACTAGGCC GTGTGACACA TTTTGAATCA CACTTTGACC GCTATAGGCC TGAAGTTCAA
ACGCGCTGGC GTGAGTCGGC AGCTCTAGGC GGAGGTTTGT GGTTTGACTT GGGCTCGCAT
TTACTCGATC AGGCACTGCA GTTGTTCGGT ACACCAAAAA CAATGTGGTT AGACCTTGCC
CGACAACGTG ATGGAGCAGT CGCAGACGAC TGGTTTCATG CTGTGCTGGG ATATGACGAA
ATGCGGGTAA TTCTTCATGG TAGTGCATTG GTTGCTAACC CTGGCCCACG TATGACCGTG
CATGGCACTA GTGGCAGTTT TACTAAGTTT GGTCTTGATA CGCAGGAAAA TGCGCTTAAG
TCAGGTCAGC AGCCTGGAAT TCCGGGATGG GGGAACGATC CACTTTCATG CAAATTATCG
CTGAAACACA AAGGCGCGAT TATCGAGCAA GACATCATAA CTACTCCAGG TAATTATCAA
GCATATTATG AAGGCATCCG CGATGCGATT TGTCTTGGCA GCCCAAATCC AGTAACAGCA
GAGCAGGCTC TTTTGGTCAT GAGACTTATT GAACTCGGCA TTGACAGTGC TCAAGAAGGT
CGTAAGTTGT TAGTGTCTGA ACGATAA
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| Protein sequence | MTKILKTGIV SYGYAAKTFH APLIKAVPGL QLAAISSSNP AKVHIDQPDL PVFSSPGELF
SCADIDLVVI PTPNETHFPL AAAALAAGKH VVLDKPFTLT TDEGKELIKL AHQCDRQLSV
FHNRRWDSDF LTLQKVLREG SLGRVTHFES HFDRYRPEVQ TRWRESAALG GGLWFDLGSH
LLDQALQLFG TPKTMWLDLA RQRDGAVADD WFHAVLGYDE MRVILHGSAL VANPGPRMTV
HGTSGSFTKF GLDTQENALK SGQQPGIPGW GNDPLSCKLS LKHKGAIIEQ DIITTPGNYQ
AYYEGIRDAI CLGSPNPVTA EQALLVMRLI ELGIDSAQEG RKLLVSER
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