Gene Sfri_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1253 
Symbol 
ID4277385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1485259 
End bp1485642 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content41% 
IMG OID638134028 
Producthypothetical protein 
Protein accessionYP_749944 
Protein GI114562431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA AACTTATCGC AGCGGCATTA ATTGGCGCGA CATCACTAGG ATTAAGTGGT 
TGTGTTATCA GTGTCGGTGA CCATGAATCG GGTAAAAGTG CTGATTATTG GCAAGTGCAA
CAAGATAAAA ATCGTGACCT GTTGAGCAAA TTGTCTATGG GAATGAGCAG TGATCAAGTG
ACAACTTTAA TGGGAACTGC TGATTTTAGT GAAGCTTATA CTAAGTCGAC TCAAAATAAT
GCAGAACAAT CCATCAAAGT GTTGTTTTAT CGTACCCAAT GGGCTGAAGG AGATGGTAAA
ACAACCAAAG ATGAATGCAC GCCAATTGTG TTCAGAGATG ACGTCTTAGT GGGCTGGGGC
GACACAGCCT ATAGACAACA CTAA
 
Protein sequence
MKLKLIAAAL IGATSLGLSG CVISVGDHES GKSADYWQVQ QDKNRDLLSK LSMGMSSDQV 
TTLMGTADFS EAYTKSTQNN AEQSIKVLFY RTQWAEGDGK TTKDECTPIV FRDDVLVGWG
DTAYRQH