| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1250 |
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| Symbol | |
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| ID | 4277365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1481231 |
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| End bp | 1483951 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134025 |
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| Product | hypothetical protein |
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| Protein accession | YP_749941 |
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| Protein GI | 114562428 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCATTGA GTTATCAGCA GATTATTTCC TACTACAAAG ATTGTTATAA GGAAGATAGC
GCCTCCATCA ATCTTTGGAA TGTGAACAAG TTTAAACAAG AAGATCGTCT CATTCTTGAG
GGGCAAGATG AACTAGGTAC AGGTTTTTTA CCTCGTTTAC CTATCCCGCA AGAATTTGCC
GAGCCAATGC TTAAACGAGT GGCGATGTAT CAAAGGGAAA GAATACTGCT GTACGCACGA
TTTCTATTTG TCGGTAAAGT AACCATAAAA GGTGAGCTCA AAACGGTTGT CTCGCCGCTA
CTGTTTAATG AAGCCACCAT TGAACAACAA AACAATAGTT TCTATTTTTC GGCCCAAGCT
GAAGACACTG AAATCAATGA AGCCCTGCTG CTGCAATTGC TACCAGAAGA TAATGAGCTA
TCACAACAGC TCATTAATGA AGACGTACAT TCACCGTCGT TTTGGACGTC ATTCTTTAAT
CACAATCACA TAGACATTCA TTCGCTTGAA TTACTGAACT ATCCAAAACT TGCCGAACAC
CAAGACATTA AAAAAGCGTT AACCCAAAAA ACACCCCGTT TGTTACCTAT TTCGATGCTA
CTTTTTGTTG AGCGGTCTTC GAGCAGTCGT GGTGTTCTTC ACGAATTAGA AAGTATCATT
AACGCCAATG AACAATCGGC TCCCATTTGT AAGCTGTTTA ACCAAACGTT TGAAAAACGG
GCTGTAAGAC TCAGAGAGCC GATACTTAAA TATGACTTTT TACCGGGGTT ATTATCTACG
CCACAAAAGA AAGTTATTCA TATCGCTGCC AATGCCGATT TAGGCTGCGT GTCTGGTCCG
CCAGGAACGG GCAAGAGCTA CACCATAGCG GCTGTTGCTG CCGAACATAT GGCGCGCGGT
GAGTCGGTGC TTATTGTGGC CAATAATGAC GTAGCCCTTG ATGTGATTGC AGCTAAATTG
GCGAGTAATT TTAACTTGGG CGAAGTGTCT ATTCGCGCAG GACAAAAAGC ATTTTTAAAA
CAATTAAAAG ATTATACCGC GGACTTACTC GCAGGATACT TTAGCGATGA CTTAAGCCAA
AACCCGCAAG CATGTGAAGA CGAACTGAAT AAGCTGCAAC GATTACTGAT AAAACTGGAA
AAACGTTTCC TGGCGTTCAG TCGCAGGTCT ATTAGCCGTG GGTTGCACCT ACATAAACTT
CAAGCACAAC AATCAACATG GCTAAAACGG GTTTATTTGT TTTTTACCCA AGGGTCAATA
AACCAATGGC ATCGACAATG GGATGCGTTA AACACTATCA ACAAGCACAC TGTCACGCGG
GAAACACTGG CAGCTGAATA TCTTAACGCA TTAAAAAAGA ATAACTTAAC CACTTTAGTT
AATCAGCACC GTAAATCGCT ACAGGCCTTT AACCAAGCTA TTCGCAGTAG AACGTCTAGT
AAACAACTTG CGTTATTTGA AAAAATAGAA TACGCCACAT TATTTGCCGC GTTTCCCATC
TGGCTCGCCA GCTTAAACAG CCTACACAGA GTATTGCCAC TTAATCGTGA GATGTTTGAT
TTAGTGATTA TTGACGAGGC AACACAGTGC AATATTAGCA GTTGCTTACC TGCGCTATAC
CGTGCAAAAC GTGTATTGAT TGTTGGCGAT ACTAAGCAAT TAAAGCACTA TTCCTTTTTA
GCCAGAAGCA AACAAACTCA ATTGCTTGCC AAAAATAATG TGCCCGAAAG CAGCCCAGGT
GCCATCAGTT ATCGAGATAA TTCCATCTTA GATTTAGCGT TAAAAACGTT AACTAGCGCG
CAAGAGTTGG CCTTTTTAGA TGAACACTTT AGAAGTAAGC CTGAGCTTAT TCATTTTAGT
AACCAGTCTT TTTATCAATC TAAATTAAAA ATCATGCAAC ATCGCCCCTG CACCAGTTCA
GGCCATTTGC ACCTTCATCG TATAGCCGGC ACTCGTGATG CATCTGGCGT TAACCCACAA
GAAGCACAGA GTTTATTAGC AGAGATCCAA CATCAAATAA CACAAGATGC CCAAACAGGC
ATCACTCATA GTATTGGGAT TATCTCGCCT TTTAGCGCAC AGGCTGAATA TATCGCCACA
TTGATTGAGC AGAAGATCCC TCAAACAGAT GTCATTAAAC ACAGCATACG CGCAGCCACG
CCGTTTGGGT TTCAAGGCGA AGAACGGGAT ATCATGCTGA TTTCATTTGC GATTGATAAC
GACAGTAAAC GTGCGGCTGC GTATTTAAAT AAAGCGGATG TGTTTAACGT CACCATTACC
AGGGCACGTC AAAAACAGTT GATATATTTG TCTATTGACG ACTCGTTATT ACCAGAACAC
AACCTGTTAC GCCAATATGT TACTTCTATA ACAACCTTTA ATGCCAAACA CAGCATGACC
ACCGAGATAG ACACATTTCA ACAAGAGATC ATTGAGGTAT TAGCAAGGTA CAAGGTAGAT
ACTTGGGCAG GATATACCAT TGCCGGCACC GAAATAGATC TATTGTGTCG TTATGCAGAA
AAATACCTTG CTGTTGATCT TATTGGTTTT CCTGGGCCTT GGGCTAACTT TTTTGAGCTA
ACAACCTACA AATTATTTAA ACGGGCTGGC GTTGAAGTAT TGCCCATAAG CTACGGATTG
TGGATTGTTG ATAAACAAGC GTGCATAGAT AAAATCACTC AAACACTAGA GTGTGGAATC
AATAATATCA GCGAAGCATA A
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| Protein sequence | MPLSYQQIIS YYKDCYKEDS ASINLWNVNK FKQEDRLILE GQDELGTGFL PRLPIPQEFA
EPMLKRVAMY QRERILLYAR FLFVGKVTIK GELKTVVSPL LFNEATIEQQ NNSFYFSAQA
EDTEINEALL LQLLPEDNEL SQQLINEDVH SPSFWTSFFN HNHIDIHSLE LLNYPKLAEH
QDIKKALTQK TPRLLPISML LFVERSSSSR GVLHELESII NANEQSAPIC KLFNQTFEKR
AVRLREPILK YDFLPGLLST PQKKVIHIAA NADLGCVSGP PGTGKSYTIA AVAAEHMARG
ESVLIVANND VALDVIAAKL ASNFNLGEVS IRAGQKAFLK QLKDYTADLL AGYFSDDLSQ
NPQACEDELN KLQRLLIKLE KRFLAFSRRS ISRGLHLHKL QAQQSTWLKR VYLFFTQGSI
NQWHRQWDAL NTINKHTVTR ETLAAEYLNA LKKNNLTTLV NQHRKSLQAF NQAIRSRTSS
KQLALFEKIE YATLFAAFPI WLASLNSLHR VLPLNREMFD LVIIDEATQC NISSCLPALY
RAKRVLIVGD TKQLKHYSFL ARSKQTQLLA KNNVPESSPG AISYRDNSIL DLALKTLTSA
QELAFLDEHF RSKPELIHFS NQSFYQSKLK IMQHRPCTSS GHLHLHRIAG TRDASGVNPQ
EAQSLLAEIQ HQITQDAQTG ITHSIGIISP FSAQAEYIAT LIEQKIPQTD VIKHSIRAAT
PFGFQGEERD IMLISFAIDN DSKRAAAYLN KADVFNVTIT RARQKQLIYL SIDDSLLPEH
NLLRQYVTSI TTFNAKHSMT TEIDTFQQEI IEVLARYKVD TWAGYTIAGT EIDLLCRYAE
KYLAVDLIGF PGPWANFFEL TTYKLFKRAG VEVLPISYGL WIVDKQACID KITQTLECGI
NNISEA
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