Gene Sfri_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1236 
Symbol 
ID4277351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1460962 
End bp1461702 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID638134011 
Producthypothetical protein 
Protein accessionYP_749927 
Protein GI114562414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACAT ATTTACGAAA CACCTTTTTG TTACTGATTT TGCTGTGCTT AAGCCCAGTG 
TTGCAGGCCG ACGACAACCC AAGTTTGCGT ATTGAGGTGC CCTTTATTGA GCTACATTCT 
GGGCCAAGTG CTGGCTACCC TGTGGTATCG ATTATCGAAA AAAATGACAT AGTCACAGTG 
CTGCTTAAGC GTACGTCCTG GTTAAAAGTG CAAAACAAAC GTGGCGTTGA AGGTTGGTTT 
CATGAAGATA ACCTAAAAGG TTTATCCCAA GATGGCCAAG CTATAAATGC GAACTTGATA 
ACAGATCAAG ACGTCATCAA TCGTCAAATA GAAGCTGGTG TCATGTACGG CGATTTAGAA 
GGTGCCAATT TTTACAATAT CTATGCAGGC TATGCATTTA CCCCCGTATT TAGTGCTGAA 
ATATCAGCGG GTAAAGCACT AGGGAGTATT TCTGACAGTG ATGTATTTGA AGTCATGCTG 
TTTAGCCAAC CTCTACCCGA CTTAATCGTA GTGCCATACA TTGGCGTTGG GGCGGGGATC 
ATTAATACCG AACCCCACAG TGTGTTAGCC GACACCGAAT CGCGTCGCAG CACCTTAATG 
AGTGCTGCGG TTGGGATTAA ATATCACCTT GCACGTAATT TTTTATTACG GGCCGAATAT 
AAACTCTCGT TAGCCTTAAC CGACCGAGAT GAAAATGAAG AGATCCAAAC ATGGAAAATA 
GGATTCAGCG TATTTTTTTA A
 
Protein sequence
MRTYLRNTFL LLILLCLSPV LQADDNPSLR IEVPFIELHS GPSAGYPVVS IIEKNDIVTV 
LLKRTSWLKV QNKRGVEGWF HEDNLKGLSQ DGQAINANLI TDQDVINRQI EAGVMYGDLE 
GANFYNIYAG YAFTPVFSAE ISAGKALGSI SDSDVFEVML FSQPLPDLIV VPYIGVGAGI 
INTEPHSVLA DTESRRSTLM SAAVGIKYHL ARNFLLRAEY KLSLALTDRD ENEEIQTWKI 
GFSVFF