| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1226 |
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| Symbol | |
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| ID | 4278476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1450521 |
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| End bp | 1451174 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134001 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_749917 |
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| Protein GI | 114562404 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA CCGACCATAT CATTGCGTTT TTACAAAATG GCGGCCCATT TATCTACCCT
ATCGCCTTAG TGTTAGTGGT CGGTTTGGCC ATTACCATTG AGCGCTGGTT ATATTTAAGC
TCTGCACATC GCACCAATCA ACAGGCTTTT GCACTGATTA AAAATGCTTT AAAAACCGGT
GACATCAACA CCATTAGCCA GCATGCACAA AACCATAAAG CCCCCGTGTT TGATGTATTG
CAGTCAGGTA TTGCCCGTAT ATCAAGTGCA AGTCGCCGTG AAGACGTGGA ATACGCCATG
GAAGAAACCG TGATGGAATA CATGTTACGC CTTGAAAAAC GCACCCCCTT TATTGCCACT
CTCGCTAACA TCGCCACCTT ATTGGGTCTA TTAGGTACCA TTATGGGCTT AATCGCAGCA
TTCTCGGCAG TGGCTAGCGC CGATCCAGCT GAAAAAGCCA ACTTATTGTC TTCTAGTATT
TCGGTTGCGA TGAACACCAC CGCATTTGGT TTGATCACTG CCATTCCGCT GATTTTATTT
CATTCAAGCC TACAAACTAA AACGGCAACT ATAGTTGACT CTATTGAAAT GGCAGGCATT
AAACTGCTCA ATTCATTGTC ATTTAACAAG CAAACGGATA ACAACCGAGG CTAA
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| Protein sequence | MSFTDHIIAF LQNGGPFIYP IALVLVVGLA ITIERWLYLS SAHRTNQQAF ALIKNALKTG
DINTISQHAQ NHKAPVFDVL QSGIARISSA SRREDVEYAM EETVMEYMLR LEKRTPFIAT
LANIATLLGL LGTIMGLIAA FSAVASADPA EKANLLSSSI SVAMNTTAFG LITAIPLILF
HSSLQTKTAT IVDSIEMAGI KLLNSLSFNK QTDNNRG
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