| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1222 |
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| Symbol | |
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| ID | 4278472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1447092 |
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| End bp | 1447973 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133997 |
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| Product | transcriptional regulator, putative |
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| Protein accession | YP_749913 |
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| Protein GI | 114562400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAA AGATAACAAC ACATTTAGAA TCAGGTTTAT TTAAGGGCAA GCCTCGCCAA
AAAACGGTTC AACACCGTAA TGCGACGACG ACGCCTGAAA TGCGTCAATT TATTCAGCAA
TCCGATTACA GTGTCAGTCA GTTATCCAAA ATTCTCAATA TCAGCGAAGC CACAGTACGT
AAATGGCGTA AACGTGACTC AATCGATAAC ACCCCGAATA CCCCGCACAA ACTCAACACG
ACACTATCTC CGATGGAAGA ATACGTGATG CTGGGCTTGC GTTATCAATT AAAAATGCCT
TTAGATCGGC TACTAAAAGT CACCCAAGAA TTTATCAACC CCAATGTCTC TCGCTCCGGC
CTTGCCCGCT GCTTAAAGCG TTTTGGGGTC TCTAAACTAG ACGAATTTGA CAGCCCTTTT
GTGCCAGAAA AATTCTTCAA TCAGCTGCCG ATTACTCAGG GCGCTGATAT ACAAACCTAT
ACCGTTAACC CTAAGACCTT AGCCGATACT TTGTCCCTGC CGAGTCCAGA TCCAGACAAC
GTAGTGCAAG TAGTGTCGTT AAGTATTCCG CCTCAATTAA CGAAGCAGCA AGCCTATTCT
GTTTTGCTTG GAGTCGATTT TAAGTCTGAC TGGGTTTACC TCGATATTTA TCAAGACAGC
CATACCCAAG CGAGTAATCG CTATATCACG CATGTCTTAA AGCACGGACC ATTTCATTTA
CGTAAGTTAT TGGTTCGCAA TTATCACACT TTTCTTGCTC GTTTTCCCGG AGCAAGTCAA
CCAGCAGCAG TATCCACTAG CACCATTGAT GCAGCTGGAT CCCAACACCA GATAACTGAA
CCTCAGTTAT CAAACGGAGA CTCATATGAG CCAATCCAGT AA
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| Protein sequence | MTKKITTHLE SGLFKGKPRQ KTVQHRNATT TPEMRQFIQQ SDYSVSQLSK ILNISEATVR
KWRKRDSIDN TPNTPHKLNT TLSPMEEYVM LGLRYQLKMP LDRLLKVTQE FINPNVSRSG
LARCLKRFGV SKLDEFDSPF VPEKFFNQLP ITQGADIQTY TVNPKTLADT LSLPSPDPDN
VVQVVSLSIP PQLTKQQAYS VLLGVDFKSD WVYLDIYQDS HTQASNRYIT HVLKHGPFHL
RKLLVRNYHT FLARFPGASQ PAAVSTSTID AAGSQHQITE PQLSNGDSYE PIQ
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