| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1219 |
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| Symbol | |
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| ID | 4278469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1431202 |
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| End bp | 1437159 |
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| Gene Length | 5958 bp |
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| Protein Length | 1985 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133994 |
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| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ |
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| Protein accession | YP_749910 |
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| Protein GI | 114562397 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.202798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTTCTC AAGCCACCCC TAAAATAGCC ATTGTCGGTT TAGCCAATCA GTATCCCGAC
GCGGATACTC CCGCTAAATT TTGGCAAAAC TTATTAGACA AAAAAGATTC ACGCAGCCAA
ATCAGTGCGA GCAAACTCAA TGCTTCACCG AGTGATTACT TGGGTGTACA AGGCGAATCG
GACCGTTTTT ATTGTGATAA AGGCGGCTAC ATTCAAGACT TTCAATTTAA CCCTCAAGGG
TATCGTATTG AGCCCGACGC ATTTACAGGT TTGGATGACA GTTTCTTGTG GGCAACCGAC
ACAGCCCGAA ATGCGTTAAC CGACGCGGGT ATAGACCTTA GCAATAACGT GCTGCAACGC
ACCGGCATTG TCATGGGCAC TTTATCGTTC CCTACAGCCA AGTCTAACGA GTTATTTGTA
CCGCTCTATC ACAGCGCGGT CGAAAAAGCC TTACAGATTA AACTCCAGCA GCCAAACTTT
AATCTGCAAT CGTTTAATCA AGCATCGCAA AACAATACCG CAGAAAATGC CAATAACAAT
AATAATGTAG CGCCTAAAAC GGTTAACTTA CGTAATGGTG CCATTGCCCA TAACGCCTCT
AAAATTGTTG CCGATGCTTT GGGATTAGGT GGTACGCAGC TAAGTTTAGA TGCCGCCTGT
GCAAGTTCGG TTTACGCATT AAAATTGGCC TGCGACTACT TGCATACCGG CAAATCAGAC
ATGATGCTGG CTGGCGCGGT GTCGGGAGCC GATCCGTTTT TTATCAATAT GGGCTTTTCG
ATATTTCATG CTTACCCAGA CCACGGTATT TCCGCCCCAT TTGATAGTAA CAGTAAAGGT
TTGTTCGCTG GTGAAGGTGC AGGGGTATTA GTGCTCAAAC GCCTTGAAGA TGCCGAGCGT
GATGGCGACC ATATTTACGC TTTGGTCAGT GGCATTGGCT TGTCGAACGA TGGTAAAGGC
CAGTTTGTGT TAAGCCCAAA CAGCAAAGGC CAAGTGCAAG CATTCGAGCG CGCTTATCGT
GATGCCGCCG CAATCGACCC AGGCATAACC CCTGCCAGCA TTGAAGTGAT TGAATGTCAT
GCTACGGGGA CACCATTAGG CGACAAAGTT GAATTAACCT CGATGGAACG TTTTTTTGAA
GATAAACTTC AAGGTAGCGC CACGCCATTA ATTGGTTCCG CAAAATCCAA TTTAGGCCAT
TTACTCACCG CAGCAGGCAT GCCTGGGATC ATGAAAATGA TTTTTGCGAT GCGTGAAGGC
GTGTTGCCAC CGAGTATTAA TATCAGTGCC CCTATCGCCT CACCTAATGG CTTATTTGGT
CAAGCGACTT TGCCAAATGA TGTGCTGCCG TGGCCCGATA AGGTCGGCAA TAAAGCCCGC
CATGCTGGCG TATCAGTATT TGGTTTTGGC GGTTGTAACG CCCATTTATT ACTTGAGTCG
TATCAAGCTA AAGCCGTTAC TGACAAGACG CTGAACAATC ATTCTCAAAA TAATAATTCT
CTAAGTAATA ACGCTCTGAA CAATAACATT CAAACTCGCA GCACAGCGCT AGTTGATGCA
GAAACGCCAA TGCACATTAC CGGCATGGCG GCGCATTTTG GTCAATGTAG CAGTATTGAT
GCACTGGCGA GTAAAATCAT CGCCAAACAA GCCATCTTTA GCCCGCTACC CACTCAGCGC
TGGAAAGGCT TAGACAAACA TCCTGAACTA TTAGCCCAAT ATGGCATCAC AGATGTACCA
CAAGGCGCGT ATATCGATCA GTTCGATTTT GATTTCTTGC GCTTTAAAGT GCCACCCAAT
GAAGATGATC GCTTAATATC GCAACAACTA CTGTTGATTA AAGTCGCCGA TGAAGCTATC
GCCGATGCCA AGCTAACACC AGGCAGTAAA GTCGCGGTAT TAGTCGCCAT GGAAACCGAA
CTCGAACTTC ATCAATTCCG CGGTCGAGTT AACTTACATA GCCAAATAGC TCAAAGCCTT
AACGCTCAAG GTATTCAATT ATCTACAGCG GAATATGACA GCCTTGAAAC CATTGCGATG
GACAGTGTCC TCGACGCCGC TAAGCTTAAC CAATACACCA GTTTTATTGG CAATATTATG
GCATCGCGGA TAGCCTCACT ATGGGATTTC AACGGCCCAG CATTTACGAT TTCTGCGGGC
GAACAGTCAG TTAACCGCTG TATAGATGTG GCGCAAAACC TGTTTGCGTT AGGGTCGTTA
CAAGAACCAT TAGATGCCAT CATTATTGCC GCTGTAGACC TGTCTGGCAG CATTGAAAAT
ATGTTGTTCA ATACCGCAAA GCTTAACGCC AAAGGATTGC GTTCAACCGA TTGGCTAGTG
GGTGAAGGGG CTGGCGCGCT AGTGCTGCAA CAAACCAGTG CTGTACACTC TCAGCTTGAT
AGTTACGCCA GTATCGACAG CGTTAACTTT ACGCCATTGT CACAATTACC AACACAACTG
CCAACACAAT TACCAACTGA GTTATCGGCA GACATTGTTG AGTTAAACCA ATCGCCGGAA
TGCATATTAA CAACTCAAGG TCGACAGTTT ACCCAAAGAT TAACTGATGC AGCTACAGCG
GTCAGCTCAG CACCGTTATT GAGTAAAGCC CATGATATTC TCGGTCATAC ATTTGCCGCT
TCAGGCATGG CCAGTTTGCT GCACGGTTTA GTGCAAACTC GTCACATCGA CAAACCGTCT
ATCAATGCCA GTGTATTCAC CAGTAGCGAC AATCAATACT CACAAGTTAA TCTGTCGGTT
TCTGCGGCGC AACAACACGC ATTGCACGCT CGACTGGGCA ATAATTTAAC TCAACAACTG
GCCACGGGCA GTAAGTTAAG TTTAATTAAA CAAGTCAGTT TAGGTGGTCG CGATATTTAC
CAACACATTA TCGACAGCCC ACTTGATACC CTCGACAGTA TTATTAATCA ATGTGCTGAT
ATTGCCCCTA CTGTGGTCAG TTCCACTGAA AGTAAGCAAC CAACTATTGG TGATAATAGC
CCTCTTAGCG TCAATAATAG CGAGAATATC GCCGAGCCTC TTATGTCAGA AAATATGCCA
AATAAAACGA TTCCAAAGCA ACCAAGGGTT GCCAGTATGA CAAATCATAC GATTCCACCA
GCACATTTAA CGGCATTCCA ACAAAATCAG TGGTTAGCAC AACAAGCGCA TTTAGCTTAT
TTAGCCAGCC GTGATGCAGG CTTAAAAGTG GCAGACAGTT TATTACGGTC CCAATTGGCT
GGTTTGAGCC ATCAACCAAC TGCGACTCAA GTCGCGTCTC CGGCGGCTAA TACTTATGCG
GTTAATGCTG CGGTTCAAAC AGTGGTTAAG AGTGAAGCAA TTAGCCCCGC TAGGTTGATC
CAACCTAATC ATGCTTGTGT GCCAGCTTAC ACTGCGCCTA TTCCAGCGGA TAAACCGTGT
ATTTGGAATT ATGCTGATTT AGTTGAATAT GCCGAAGGCG ATATCGCTAA GGTGTTTGGC
CCAGATTACG CCATTATCGA CAGTTACTCG CGCCGAGTTC GCTTGCCGAC CACAGATTAT
TTATTGGTGT CGCGTGTGAC TAAACTCGAT GCCACCATGA ATCAATACAA ACCGTGTTCA
ATGACCACAG AATACGACAT CCCCGTCGAT GCGCCGTATT TAGTGGATGG TCAAATTCCT
TGGGCTGTAG CGGTAGAATC GGGTCAGTGC GATTTAATGT TGATCAGTTA TTTAGGTATC
GACTTTGAAA ACAAAGGCGA ACGAGTTTAT CGCTTATTAG ATTGTACTTT GACCTTCTTA
GCCGATTTAC CTCGTGGCGG CGACACTCTG CGTTACGACA TTAAAATCAA TAACTTTGCC
AGCAATGGCG ACACGTTATT ATTCTTTTTC TCTTACGAGT GTTTCGTAGG CGACAAGATG
ATCCTAAAAA TGGATGGTGG CTGTGCAGGC TTCTTTACCG ACCAAGAGCT GGCCGATGGT
AAAGGGGTTA TTCAAACTGA AGATGAAATA AAACATCGCC AACAAGTGAT CAACAATCCA
AATAAACCAA CCTTTACCCC ATTACTCCAC TGTAGCCAAA CGGCATTTGA TTATGGTCAA
ATCCATCATT TATTGACTGG TGATATTGGC AGCTGTTTTG GTGGCGACCA TGTCGCGCAC
CAACTGCAAA CTGGAATACA AAAATCGCTT TGTTTTGCCT CAGAAAAATT CTTAATGATT
GAGCGAGTGA GTCAATTACA AACACAAGGT GGCGCGTGGG GCTTAGGCTT ACTCGAAGGT
CATAAACACA TTGCGCCAGA CCATTGGTAT TTCCCTTGTC ATTTCCAAGG CGACCAAGTG
ATGGCAGGCT CGTTAATGGC AGAAGGTTGT GGCCAGCTAT TACAGTTCTT TATGATCCAC
ATCGGCATGC ATACTCTAGT AGAAAATGGC CGATTCCAAC CATTGGAAAA TGCTTCGCAA
AAAGTTCGCT GTCGTGGCCA AGTGTTACCA CAAACGGCTG AGCTGACCTA TCGCATGGAA
GTGACTGAAA TCGGTATTCA TCCCCGCCCG TATGCCAAAG CCAATATTGA TATTTTACTC
AATGGAAAAG TCGTGGTCGA TTTCCAAAAC TTGGGTGTGA TGATTAAAGA AGATGCCGAA
TGTACTCGTT ATCCGCTTAT CTCGTTAGAC GCTAGCCCTG CAGTTGATTC AAACGCTAGC
AGTAAAGTGA TTGCTAACAA AGCGCCGTTA ATGGCGCAAA TTCCAGATTT AAACGCCCCG
ACTAACAAAG GCGTTATTCC ACTAAAACAC GTTGAAGCGC CCATTGTAAG CGCCGATTCA
AAGTACGCTA ATCGCGTGCC TGATACCGTT CCATTTACCC CATACCATAT GTTTGAGTTT
GCTACTGGCG ATATCGAAAA ATGCTTTGGC CCTGACTTTA GTATTTACCG CGGACTTATC
CCACCGCGCA CACCTTGTGG CGACTTACAG TTAACCACTC GCGTGGTTGA AATTAACGGT
AAACGCGGCG AATTGAAAAA GCCATCATCG TGTATAGCAG AATACGAAGT GCCGGCAGAT
GCTTGGTACT TTGCTAAAAA CAGCCATCAA GCGGTAATGC CTTATTCGGT GTTAATGGAA
ATTTCATTAC AACCCAATGG CTTTATTTCT GGCTACATGG GCACCACCCT AGGCTTTCCT
GGGCAAGAGC TATTTTTCCG TAACTTAGAC GGTGGCGGAC AATTATTACG TCATGTGGAT
TTACGCGGTA AAACTATCGT CAATGATTCA AAGCTATTAT CAACCGTCAT TGCTGGCAGT
AACATTATTC AAAGCTTCAC CTTTGAGTTA AGTGTCGATA ACGAGCCTTT TTACACAGGT
AGCGCGGTAT TTGGTTACTT TAAAGGTGAT GCGCTTAAGA ACCAGTTAGG CATAGATAAC
GGCAAAATAA CTCAACCATG GCATGTTGAT AACAATGTCA TGGCAGACAT CAGCGTTAAC
TTACTGGATA AACAGTCACG GGTATTTACT CCGCCAACTA GCCAACCGCA TTATTGTTTA
GCGGGTGGCC AGCTTAACTT TATCGACAAA GCAGAAATTG TTGAAGCGGG CGGGAAATAC
GGTAAAGGCT ATCTTGCTGC GTCACGCACT ATTGACCCTA GTGATTGGTT CTTCCAATTC
CACTTCCATC AAGATCCGGT AATGCCAGGT TCATTAGGTG TTGAAGCTGT GATCGAGTTA
ATGCAAACTT ACGCCATCAG CACAGACCTA GGTAAAGGTT TCACTAATCC AAAGTTCGGC
CAAATATTGT CGGATATTAA ATGGAAATAT CGCGGTCAAA TTAACCCACT GAACAAACAA
ATGTCACTTG ATGTACATAT CAGTGCAGTA AAAGATGAAG ACGGTAAACG CATCATAATA
GGCGACGCAA ATCTCAGTAA AGATGGTCTG CGCATTTATG AAGTCAAAGA TATCGCCATC
TGTATTGAAG AAGCTTAG
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| Protein sequence | MSSQATPKIA IVGLANQYPD ADTPAKFWQN LLDKKDSRSQ ISASKLNASP SDYLGVQGES
DRFYCDKGGY IQDFQFNPQG YRIEPDAFTG LDDSFLWATD TARNALTDAG IDLSNNVLQR
TGIVMGTLSF PTAKSNELFV PLYHSAVEKA LQIKLQQPNF NLQSFNQASQ NNTAENANNN
NNVAPKTVNL RNGAIAHNAS KIVADALGLG GTQLSLDAAC ASSVYALKLA CDYLHTGKSD
MMLAGAVSGA DPFFINMGFS IFHAYPDHGI SAPFDSNSKG LFAGEGAGVL VLKRLEDAER
DGDHIYALVS GIGLSNDGKG QFVLSPNSKG QVQAFERAYR DAAAIDPGIT PASIEVIECH
ATGTPLGDKV ELTSMERFFE DKLQGSATPL IGSAKSNLGH LLTAAGMPGI MKMIFAMREG
VLPPSINISA PIASPNGLFG QATLPNDVLP WPDKVGNKAR HAGVSVFGFG GCNAHLLLES
YQAKAVTDKT LNNHSQNNNS LSNNALNNNI QTRSTALVDA ETPMHITGMA AHFGQCSSID
ALASKIIAKQ AIFSPLPTQR WKGLDKHPEL LAQYGITDVP QGAYIDQFDF DFLRFKVPPN
EDDRLISQQL LLIKVADEAI ADAKLTPGSK VAVLVAMETE LELHQFRGRV NLHSQIAQSL
NAQGIQLSTA EYDSLETIAM DSVLDAAKLN QYTSFIGNIM ASRIASLWDF NGPAFTISAG
EQSVNRCIDV AQNLFALGSL QEPLDAIIIA AVDLSGSIEN MLFNTAKLNA KGLRSTDWLV
GEGAGALVLQ QTSAVHSQLD SYASIDSVNF TPLSQLPTQL PTQLPTELSA DIVELNQSPE
CILTTQGRQF TQRLTDAATA VSSAPLLSKA HDILGHTFAA SGMASLLHGL VQTRHIDKPS
INASVFTSSD NQYSQVNLSV SAAQQHALHA RLGNNLTQQL ATGSKLSLIK QVSLGGRDIY
QHIIDSPLDT LDSIINQCAD IAPTVVSSTE SKQPTIGDNS PLSVNNSENI AEPLMSENMP
NKTIPKQPRV ASMTNHTIPP AHLTAFQQNQ WLAQQAHLAY LASRDAGLKV ADSLLRSQLA
GLSHQPTATQ VASPAANTYA VNAAVQTVVK SEAISPARLI QPNHACVPAY TAPIPADKPC
IWNYADLVEY AEGDIAKVFG PDYAIIDSYS RRVRLPTTDY LLVSRVTKLD ATMNQYKPCS
MTTEYDIPVD APYLVDGQIP WAVAVESGQC DLMLISYLGI DFENKGERVY RLLDCTLTFL
ADLPRGGDTL RYDIKINNFA SNGDTLLFFF SYECFVGDKM ILKMDGGCAG FFTDQELADG
KGVIQTEDEI KHRQQVINNP NKPTFTPLLH CSQTAFDYGQ IHHLLTGDIG SCFGGDHVAH
QLQTGIQKSL CFASEKFLMI ERVSQLQTQG GAWGLGLLEG HKHIAPDHWY FPCHFQGDQV
MAGSLMAEGC GQLLQFFMIH IGMHTLVENG RFQPLENASQ KVRCRGQVLP QTAELTYRME
VTEIGIHPRP YAKANIDILL NGKVVVDFQN LGVMIKEDAE CTRYPLISLD ASPAVDSNAS
SKVIANKAPL MAQIPDLNAP TNKGVIPLKH VEAPIVSADS KYANRVPDTV PFTPYHMFEF
ATGDIEKCFG PDFSIYRGLI PPRTPCGDLQ LTTRVVEING KRGELKKPSS CIAEYEVPAD
AWYFAKNSHQ AVMPYSVLME ISLQPNGFIS GYMGTTLGFP GQELFFRNLD GGGQLLRHVD
LRGKTIVNDS KLLSTVIAGS NIIQSFTFEL SVDNEPFYTG SAVFGYFKGD ALKNQLGIDN
GKITQPWHVD NNVMADISVN LLDKQSRVFT PPTSQPHYCL AGGQLNFIDK AEIVEAGGKY
GKGYLAASRT IDPSDWFFQF HFHQDPVMPG SLGVEAVIEL MQTYAISTDL GKGFTNPKFG
QILSDIKWKY RGQINPLNKQ MSLDVHISAV KDEDGKRIII GDANLSKDGL RIYEVKDIAI
CIEEA
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