Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1212 |
Symbol | |
ID | 4278026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1421892 |
End bp | 1422797 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133987 |
Product | alpha-L-glutamate ligases, RimK family protein |
Protein accession | YP_749903 |
Protein GI | 114562390 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0387338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATTG CAATAATGTC GAGAAATAAG AATTTATACT CGACAAGTCG GTTAAAAGAA GCTGCTGAAG CTCGCGGTCA TGTCATAAAA ATTGTCGACC CATTAAAGTG TTATATGAAC ATCAATATGA ATGCCCCTAG CATTCATGTT CGTGGTGAAG AACTACCAAA ATTTGATGCG GTTATTCCAC GTATTGGTGC ATCTGTCACT TTTTATGGTA CCGCGGTATT GCGCCAGTTT GAGATGATGG GCACTCACCC GTTAAACGAG TCTGTTGCTA TTACTCGCTC ACGGGATAAA TTACGTTCAT TGCAACTCTT GTCTCGTAAG AATATTGGTT TACCCGTGAC TGGTTTTGCT AGTAAGCCTG CTGATATTCC TGATTTATTG GACATGGTTG GTGGTGCCCC TTGTGTTATT AAGTTACTTG AAGGTACTCA AGGTATTGGT GTTGTCTTAG CTGAAACTCG TAAAGCGGCT GAATCTGTTA TTGAAGCATT TATGGGCCTA AAAGCTAACA TCATGGTGCA AGAATATATC GCTGAAGCTG GAGGTGCAGA TATCCGCTGC TTCGTTATTG GTGATAAAGT GATTGCTGCA ATGAAACGCC AAGCATTACC CGGTGAGTTC CGTTCTAATT TACACCGTGG GGGTTCTGCT AGCATTGTTA AGTTAACGCC TGAAGAGCGT TCGACCGCGT TGCGTGCTGC CAAAACAATG GGTCTTAATG TCGCTGGTGT AGATATTTTA CGTTCAAAAC ACGGCCCATT AGTGATGGAA GTTAACTCAT CTCCAGGTCT TGAAGGCATC GAAAAAGCTA CTGGTATTGA TGTTGCTGAA AAAATTATTC AGTTTATTGA GAAAAACGTT AAATCCACAA GTTCAAAAAC GAAAGGTGTT GGTTAA
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Protein sequence | MHIAIMSRNK NLYSTSRLKE AAEARGHVIK IVDPLKCYMN INMNAPSIHV RGEELPKFDA VIPRIGASVT FYGTAVLRQF EMMGTHPLNE SVAITRSRDK LRSLQLLSRK NIGLPVTGFA SKPADIPDLL DMVGGAPCVI KLLEGTQGIG VVLAETRKAA ESVIEAFMGL KANIMVQEYI AEAGGADIRC FVIGDKVIAA MKRQALPGEF RSNLHRGGSA SIVKLTPEER STALRAAKTM GLNVAGVDIL RSKHGPLVME VNSSPGLEGI EKATGIDVAE KIIQFIEKNV KSTSSKTKGV G
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