Gene Sfri_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1211 
Symbol 
ID4278025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1421457 
End bp1421888 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content42% 
IMG OID638133986 
Producthypothetical protein 
Protein accessionYP_749902 
Protein GI114562389 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.435819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC ATTCCCTCGG TATTGTGGGT TGGCGTGAAT GGGGCACTTT TCCTGATATT 
GGCAACGAAA GAGTCAAAAT CAAAGTGGAT ACTGGCGCAA AAACATCTTG TTTACATGCG
TTCAAAATAA AACCGTTTCA AAAAGAAAAC CAAAAATGGG TTCGAGTCTG GCTTCACCCT
GACCAAGGTT CAGATCGTGA AGTCGTCTGT GAATTCCATG TCTTTGATCG CCGAGATGTT
AGTGACTCTG GTGGTCATGT AACGAAACGC TACGTGATAA AAACGCCGAT CTTAATCGGT
GACCAACTTT TTGACATCGA ACTGACGTTA ACCAATAGAG ATCACATGAA ATTTAGAATG
TTATTGGGAC GCCGCGCATT AGAAGGGCGT TTTTTGGTTA ATTCAGCAGA ATCATTTCTA
GCAGGAGAAT AA
 
Protein sequence
MTEHSLGIVG WREWGTFPDI GNERVKIKVD TGAKTSCLHA FKIKPFQKEN QKWVRVWLHP 
DQGSDREVVC EFHVFDRRDV SDSGGHVTKR YVIKTPILIG DQLFDIELTL TNRDHMKFRM
LLGRRALEGR FLVNSAESFL AGE