| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1190 |
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| Symbol | fliN |
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| ID | 4277059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1401322 |
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| End bp | 1401705 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133965 |
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| Product | flagellar motor switch protein |
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| Protein accession | YP_749881 |
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| Protein GI | 114562368 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACAG AAGATACAGG CGATGACTGG GCTGCAGCAA TGGCAGAGCA AGCTTTAGAA
GAAGCAGAAC ATGTCGAACT TGATGAGTTA GTCGATGACT CTAGACCGAT CACGAAAGAA
GAAGCAGCCA AGTTAGACGG TATTCTAGAT ATTCCGGTAA CGATTTCCAT GGAAGTGGGT
CGTAGTTTTA TTAGCATCCG TAATTTACTC CAGCTCAACC AAGGTTCGGT GGTCGAACTT
GACCGTGTAG CTGGTGAGCC TTTAGACGTT ATGGTTAATG GAACCTTAAT TGCTCATGGT
GAGGTAGTGG TAGTGAATGA CAAATTTGGT ATCCGTCTAA CGGATGTTAT TAGCCAAACA
GAACGTATTA AAAAACTAAA ATAA
|
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| Protein sequence | MSTEDTGDDW AAAMAEQALE EAEHVELDEL VDDSRPITKE EAAKLDGILD IPVTISMEVG
RSFISIRNLL QLNQGSVVEL DRVAGEPLDV MVNGTLIAHG EVVVVNDKFG IRLTDVISQT
ERIKKLK
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