| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1186 |
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| Symbol | |
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| ID | 4277055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1397348 |
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| End bp | 1397794 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133961 |
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| Product | flagellar export protein FliJ |
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| Protein accession | YP_749877 |
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| Protein GI | 114562364 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2882] Flagellar biosynthesis chaperone |
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| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCGAA CTGACCCACT ATTGACGGTT TTGAAGTTAG CCACCGCCGC AGAAGATCAA
GCGGCATTAC AGCTTAAGTC TGCGCAATTT GAAAAACAAA AACGCCAGGG CCAGTTGGAT
GCACTAAATA ACTATCGTTT AGATTATATG AAACAGATGG AAGGGCACAC TGGTACTACA
TTACGTGCTA ACCAATACCA TCAATTTCAT CAATTTATTC GCCAAGTAGA TAGTGCAATC
ACCCAGCAAG TTGCCGCTGT TAAAGATGCC GAAAAACAGG TGGGTTATCG TCAAATTCAT
TGGCAAGAAA AACAACAAAA ACGCAAAGCG GTAGAAATGC TATTAAGCCA AAAAGCAACT
AAAGCGATGG TAATAGAAGC TAAACGCGAA CAAAAAATGT CGGATGAATT TGCTATGCAG
CAATATTTTC GTCGAAATCT TAAATAG
|
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| Protein sequence | MTRTDPLLTV LKLATAAEDQ AALQLKSAQF EKQKRQGQLD ALNNYRLDYM KQMEGHTGTT
LRANQYHQFH QFIRQVDSAI TQQVAAVKDA EKQVGYRQIH WQEKQQKRKA VEMLLSQKAT
KAMVIEAKRE QKMSDEFAMQ QYFRRNLK
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