Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1184 |
Symbol | fliH |
ID | 4277053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1394810 |
End bp | 1396021 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133959 |
Product | flagellar assembly protein H |
Protein accession | YP_749875 |
Protein GI | 114562362 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAT CAAAATCGCC TAAAGATGCA CTCAATACGG ATAGCGAGTA TGAATTTAGT CATTGGCAAT TACCTGATAT TACCAAAGAT AGTAGCCTAG AACCTTCAAA TTTGTTCGGT CAGTTTTCTG AAGCCCACAC GCCTACTCCT GTTACTGGGG CCGAGAAGTC TATGGCGCCA CCGACTATGG CGCAAATTGA AGACATCCGC GCTGCAGCTG AGCAAGAAGG ATTTGAACAG GGTAAGCAAG AAGGTCATCA ACAAGGATTA GAGCAAGGGC GTTTAGAAGG ACTGGAGCAA GGTCATCAAC AAGGGTTTAC TCAAGGCGAG CAACAAGGAT TAGAAGCTGG GCAAATTAAA GCCAATGAGC TTATTGCACA ACTTAACCAC ATTATTTCCC AATTCGAGTT ACCATTATCC ATCTTAGATA ATGAAATTGA AGCTGAATTA TTGGCCATGA CAATCAGTTT AGCCAAATCG GTTATCGGCC ATGAACTTAA GACTCACCCA GAACATATAT TATCGGCTTT ACGTCAAGGT GTTGACGCAC TTCCATTAAA AGAACAGTTG GTTAAGTTAC GTTTTAATCA GGCTGACGCT GAACTCGTAA ACCAATGTTA CAGTGCCGAA CAATTGCAAA GAAATCAATG GCAAATCGAT ATTGATCCAA CGTTAGCTAA TGGTGACTGT ATGATTGAAA GTGTCCGTTC TGCTGTCGAT TTACGTGTAG AACAGCGTAT TAGCCAAGTG TTTAGTGAAT TAGACGCTCA ATCGAATCAG TTAGCAAAAA ATGTCCAGCA GCAAAAATCA ACTCATCCAC AATATCAAAC CACATCTGTC GATAATTTGA GTGAACATCA GCAAGCCGCT GAGCTTGCAG GTAGAACCGA TAGCACAGAA AACACCGATA GGGACGAGAT TGGCCAAGGT GATGTTGAAG AACTTGGCGC AGAGATGGGC GCTGATAAGG TTGCAGAACC GTTAGTTCAA CAAATTGATA CTTCTTCGGC AGCGTCAATC GATGCTGAAG ACTCTGATGT TGTTGATTCT GATGGAGGTG TAACTCTCGA TACAAGCACG CCTCTCGATA CAAGTGCGCC TCTCAATACA AATGCACAAG CTGACACCTC AATAGCTGAT AAAGTGGCTG ATGCTCAGCA ACAGACGAAA GACCTATCTC AAGGAAATAC CGATGAGCAC TCGTCAACAT AA
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Protein sequence | MPESKSPKDA LNTDSEYEFS HWQLPDITKD SSLEPSNLFG QFSEAHTPTP VTGAEKSMAP PTMAQIEDIR AAAEQEGFEQ GKQEGHQQGL EQGRLEGLEQ GHQQGFTQGE QQGLEAGQIK ANELIAQLNH IISQFELPLS ILDNEIEAEL LAMTISLAKS VIGHELKTHP EHILSALRQG VDALPLKEQL VKLRFNQADA ELVNQCYSAE QLQRNQWQID IDPTLANGDC MIESVRSAVD LRVEQRISQV FSELDAQSNQ LAKNVQQQKS THPQYQTTSV DNLSEHQQAA ELAGRTDSTE NTDRDEIGQG DVEELGAEMG ADKVAEPLVQ QIDTSSAASI DAEDSDVVDS DGGVTLDTST PLDTSAPLNT NAQADTSIAD KVADAQQQTK DLSQGNTDEH SST
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