| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1179 |
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| Symbol | |
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| ID | 4278447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1388861 |
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| End bp | 1389931 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133954 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_749870 |
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| Protein GI | 114562357 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTTTG CTACCAACTT AGCAACTAAC TTAGCCACTC CCGTTATCAG TACTTATTCT
AGTAAGGCCG CCAATATGTC AAATCAAATG GCGCATATTC TTCAAGCCAT GCCATCTGGT
GTGGTGATCC TTGATGGTGA CGGTGTGGTT ACGTTAGCCA ACCCAGTTGC AACCGAACTA
TTAGGACGAC CTCTGCAGGG GGCTCGTTGG TTTGATATTA TTCATCGCGC TTTTGCCCCA
CAAGATGATG ACGGCCATGA AGTGTCGCTT AAAAATGGTC GACGAGTAAA ATTGGCTATT
ACGCCATTAG CGCCTGAACC TGGGCAGTTG ATTGTGTTAA CCGATCTCAC TGAAACGCGT
TTATTGCAGA AAAACTTGTC TCATTTACAA CGTTTATCGG CATTAGGCAA AATGGTGGCG
ACATTAGCAC ATCAGGTGCG CACCCCATTG TCTGCAGCTT TGCTGTATGC CTCTAATCTT
GCTAGCCCTA AATTATCTGA TTCTGCTAGG TCTAAGTTTC AATCTAAATT GGTCGACCGG
CTTAATGAGC TAGAACGTCA AGTTAATGAC ATGTTGCTAA TGGCAAGGGG ACGTCAAGAT
GGGATGGCTG AATCAGTCTC AATGGATGAA ATCATTAACC AAGTGATGGC TAGCTGCGAA
CCGATTGCAG ATAAAAAGCA CTGTCAGCTA GTTGTGGAAG ATACTTCACA TTCATTGATG
CTTGCCAATG CGAATGCTCT CAGTTCTGCC GTTAATAATT TAGTGATGAA TAGCATTGAA
GCGGGCGCCA CAAAAATAAA AGTCAGTGCC AGCGAAACAC CAGATGGGCT ATTGTTAGAT
GTCATCGATA ATGGCAAAGG GCTCGAGCCG TCAATGCAAC AACAAATTCT TGAACCCTTT
TTTACCACTA AAAGCCAAGG TACTGGTTTA GGCTTAGCGG TTGTGCAGTC GGTAGTGCGT
AACCATGGCG GACAAATTCA ATTGTCGTGT AAGCCGGGTA TGGGTTGCCA TATTAGGTTG
AGCTTTCCAC ACATGAACAA AGCAAGTGAT CAGGAGGTGA TGCGTGGCTG A
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| Protein sequence | MNFATNLATN LATPVISTYS SKAANMSNQM AHILQAMPSG VVILDGDGVV TLANPVATEL
LGRPLQGARW FDIIHRAFAP QDDDGHEVSL KNGRRVKLAI TPLAPEPGQL IVLTDLTETR
LLQKNLSHLQ RLSALGKMVA TLAHQVRTPL SAALLYASNL ASPKLSDSAR SKFQSKLVDR
LNELERQVND MLLMARGRQD GMAESVSMDE IINQVMASCE PIADKKHCQL VVEDTSHSLM
LANANALSSA VNNLVMNSIE AGATKIKVSA SETPDGLLLD VIDNGKGLEP SMQQQILEPF
FTTKSQGTGL GLAVVQSVVR NHGGQIQLSC KPGMGCHIRL SFPHMNKASD QEVMRG
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