Gene Sfri_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1168 
SymbolflgI 
ID4278436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1374690 
End bp1375796 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content46% 
IMG OID638133943 
Productflagellar basal body P-ring protein 
Protein accessionYP_749859 
Protein GI114562346 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0244391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTA AACTGCTTAT GTCGACTGTC GCAGTAGTCG CATCAATACT AATGCTAACC 
GCGCCTGCAC ATGCCGAACG GATTAAAGAC ATCGCCAGTA TTCAAGGGGT GCGAAGTAAC
CAATTAGTGG GTTATGGCTT GGTGGTGGGT TTGCCTGGTA CTGGGGAAAA AACCCGTTAT
ACCGAACAAA CCTTTAGAAC CATGCTCAAA AATTTCGGTA TTAATTTACC AGACTCTGTT
CGTCCTAATT CAAAGAATGT CGCTGTCGTT GCTGTGCATG CCGAAATGCC GGCCTTTATT
AAGCCGGGTC AAAATCTTGA CATTACCGTG TCCAGTTTAG GTGAAGCAAA AAGTTTACGT
GGTGGCACTT TATTACAAAC TTTCTTGAAA GGGGTCGATG GCAATGTGTA TGCCATTGCT
CAGGGAAGCT TAATTGTAAG TGGTTTTAGT GCCGAAGGGC TAGATGGCTC AATGGTGATT
CAAAACACTC CAACCGTTGG CCGTATCCCA AGTGGTGCCA TTGTCGAGCG CAGTGTAATT
AGTCCGTTTG CTAGTGGTGA TTATCTTACG TTTAATTTAC GTCGTTCTGA TTTTTCTACG
GCCAAACGTA CCGCAGATGC AATTAACGAT TTACTTGGCC CAGACATGGC AAAGGCAATT
GACGCCACAT CTATTCAAGT GAGCGCGCCA CGCGATGCTT CACAGCGGGT GTCGTTTTTA
TCGGTATTAG AAAACATTGA AGTTATACCC GCAGAAGAAT CAGCCAAAGT GATTGTTAAC
TCACGTACCG GCACCATTGT GGTTGGCCAA AACGTCAAGT TATTACCCGC GGCTGTCACT
CACGGCGGAT TAACTGTGAC TATTGCTGAG GCGACCCAAG TGTCACAACC CAACGCATTA
GCGGGTGGTG ATACGGTTGT TACGACAAAC AGTACGATTG ATGTGTCAGA AAAAGATCGT
CGTATGTTTA TGTTTAATCC AGGTACCACA CTTGATGAGC TTGTCAGAGC CGTGAATTTA
GTGGGTGCAG CACCATCAGA CGTACTTGCC ATACTCGAAG CGTTAAAAAT GGCAGGCGCT
TTGCATGGTG AACTTATCAT CATCTAA
 
Protein sequence
MKTKLLMSTV AVVASILMLT APAHAERIKD IASIQGVRSN QLVGYGLVVG LPGTGEKTRY 
TEQTFRTMLK NFGINLPDSV RPNSKNVAVV AVHAEMPAFI KPGQNLDITV SSLGEAKSLR
GGTLLQTFLK GVDGNVYAIA QGSLIVSGFS AEGLDGSMVI QNTPTVGRIP SGAIVERSVI
SPFASGDYLT FNLRRSDFST AKRTADAIND LLGPDMAKAI DATSIQVSAP RDASQRVSFL
SVLENIEVIP AEESAKVIVN SRTGTIVVGQ NVKLLPAAVT HGGLTVTIAE ATQVSQPNAL
AGGDTVVTTN STIDVSEKDR RMFMFNPGTT LDELVRAVNL VGAAPSDVLA ILEALKMAGA
LHGELIII