| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1161 |
|---|
| Symbol | flgB |
|---|
| ID | 4277870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1369097 |
|---|
| End bp | 1369495 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638133936 |
|---|
| Product | flagellar basal body rod protein FlgB |
|---|
| Protein accession | YP_749852 |
|---|
| Protein GI | 114562339 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1815] Flagellar basal body protein |
|---|
| TIGRFAM ID | [TIGR01396] flagellar basal-body rod protein FlgB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTA ATTTCGATAA TGCATTAGGT GTTCACCAAT ATTCTTTGGG CGTTCGAGCG
CAAAGAGCAG AAGTGATTTC AAGTAATATC GCCAATGCCA ATACTCCTCA TTATAAAGCT
CAAGATGTCA ATTTTGCTTC TGCTATGCAA GCTGCAAGCT CGCATCAGAA AGGCTTGAGT
ATGAGCCAAA CTACAGAGAA ACATTTTGAT TTAACGGCGT TAAGTCAACA GCATGTTCAA
TATCGTATGC CAAATCAAGC TGATACTGGC GATGGTAATA CTGTCGATAC GCAAAAAGAG
CAAGCTGCAT TTATGCAAAA TGCGCTCGAA TATCAAATGT CATTAGGCTT TCTTGAGGGA
AAATTTAATG GCATGCGTAA AGCATTGCGA GGTGATTAA
|
|---|
| Protein sequence | MAINFDNALG VHQYSLGVRA QRAEVISSNI ANANTPHYKA QDVNFASAMQ AASSHQKGLS
MSQTTEKHFD LTALSQQHVQ YRMPNQADTG DGNTVDTQKE QAAFMQNALE YQMSLGFLEG
KFNGMRKALR GD
|
|---|
| |