Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1160 |
Symbol | |
ID | 4277869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1368127 |
End bp | 1368960 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638133935 |
Product | MCP methyltransferase, CheR-type |
Protein accession | YP_749851 |
Protein GI | 114562338 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGATA AATCACTTGC TGAAGCAGAG TACAATCAAT TTAGACTGTT TTTAGAACAG CATAGCGGTA TTGTGTTAGG TGAGAACAAA CAATATTTAG TACGCAGTCG TTTAGCTCCT TTGATGGGAA AGCATAATTT GCCTTCTTTG TCTGAGGTGG TTAAAAAATC GATGAAACCG ATAGAGCGGC AACTGCGCGC TGAAGTGATA GATGCGATGA CCACCAATGA AACGTTATGG TTTCGAGACC GTTATCCATT TGAATTACTG CACAATACTC TACTGCCTGA ATACAGCAAG CTTGGCAGAC CATTAAAAAT TTGGTCGGCG GCATGCTCTT CAGGGCAAGA ACCTTATTCG TTGGCCATGA CGGTGTTGGA ATATCAACAG CGTAAACCTG GTACTTTACC AGGAGGCGCG ACGATTCAGG CAACAGACTT ATCACCTTCT ATGTTAGATC GTTGTAAGAA TGCTGAATAT GATGGTTTAG CACTTGCTCG TGGTTTGTCT GAAGAACGTA AACGTCAGTT TTTTGATGCT TTGCCTTCAG GCAACATGAA AGTTAAAGAT AATGTGAAGC GTTTAGTTAA CTTTAGAGCC CATAATCTAC TTGAAAGTTA TAGCTTATTA GGTAAATACG ATATTATTTT TTGCCGCAAT GTGTTGATTT ACTTTGCTCC TGAGGCAAAG GCTAAAATTT TGCGGCAATT TGCTGCCGCA CTTAATCCTA AGGGTATTTT ATTTTTGGGT GCGTCAGAAT CTCTAGCAGG GTTAACCGAT GAATTTAATA TGGTTCGCTG TAATCCTGGG ATCTATTATC AAAAGAAAAC CTAG
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Protein sequence | MTDKSLAEAE YNQFRLFLEQ HSGIVLGENK QYLVRSRLAP LMGKHNLPSL SEVVKKSMKP IERQLRAEVI DAMTTNETLW FRDRYPFELL HNTLLPEYSK LGRPLKIWSA ACSSGQEPYS LAMTVLEYQQ RKPGTLPGGA TIQATDLSPS MLDRCKNAEY DGLALARGLS EERKRQFFDA LPSGNMKVKD NVKRLVNFRA HNLLESYSLL GKYDIIFCRN VLIYFAPEAK AKILRQFAAA LNPKGILFLG ASESLAGLTD EFNMVRCNPG IYYQKKT
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