| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1158 |
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| Symbol | flgA |
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| ID | 4277867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1366056 |
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| End bp | 1366763 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638133933 |
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| Product | flagellar basal body P-ring biosynthesis protein FlgA |
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| Protein accession | YP_749849 |
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| Protein GI | 114562336 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
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| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.623618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAT TTTTTTTATG TTTTTTGTGC TCAATAACAT TTTCTTTGCC AGCATTTGCT
AGCGAAGAAA TAATCACACC TTCCCTATCG ACCATTTATA AGTTAGCTAA AGAGGCGGTA
GCCAAAAAAA TTGATGCCGA CTCAAAAGCT AAAGTGCAAA TAACCCCACA AAATCTTGAG
GGCCGTATCA GCCCACCAGC CTGTTACCCG CCGATTAATG TTGAACTTGC CAGTGAACGA
GCTATTAGTC GAAATAACAT GGTAAAACTC AGCTGCAATA GCCCAGACTT TGATTATCCA
TGGCAAATGT ATCTCTCTGT TCGAGTCGAA ATACAATATC CTGTTGTGGT TGCTAACCAA
CTATTGTCCC CAGACCAAAT TATTGGCGAA CATCATTTAC AAGTTATGTA TGTTGACCAA
TATAGCTTAA AAGGTCAGTT TTTTTCCGAC ATTACGACAT TAATTGGCTC ACGAGTGAAA
CGCCGGGTAG CGAAAGACTC TCCAGTATTA AGTAATAACC TGTGTTTTGT TTGCAAAGGT
GACACTGTTT CTATCTATGC AAAAACCACT AATGTAGAAA TAAAAACCCT TGGGGAAGCA
CTGCGAGATG GCAATATCGA TGAGGTTATC AGAGTAAAAA ACAGTAACAC TAGCAAACAA
TTTGATGCTG TTGTAATTGG CGTTGGCGAA GTTGAAGTAA GAATGTAA
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| Protein sequence | MKVFFLCFLC SITFSLPAFA SEEIITPSLS TIYKLAKEAV AKKIDADSKA KVQITPQNLE
GRISPPACYP PINVELASER AISRNNMVKL SCNSPDFDYP WQMYLSVRVE IQYPVVVANQ
LLSPDQIIGE HHLQVMYVDQ YSLKGQFFSD ITTLIGSRVK RRVAKDSPVL SNNLCFVCKG
DTVSIYAKTT NVEIKTLGEA LRDGNIDEVI RVKNSNTSKQ FDAVVIGVGE VEVRM
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