Gene Sfri_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1150 
Symbol 
ID4277859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1359660 
End bp1360592 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content44% 
IMG OID638133924 
Producthypothetical protein 
Protein accessionYP_749841 
Protein GI114562328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTT ATAACGTTAA CGTAATTCAG CCAAAATCAT TGAGTACATC AGCGTTGTCA 
ATTTTGCTAG CATCGGGACT GTTGTTAAGT CAGCATGCTT TAGCAGCGCC AGAACGTTCA
CCATTTTCGC TCACTGTGGC TCGTACATCA ACGGGTACCG CTAATGTTGG GGCTGATAGC
AATAACCCTA ATCAGTTACA GCGTGATGCT TGGAAGACCA GTTTTTCGGC CAGCATGCCA
CTCAATCGTC AGTGGTCAAT TGGGGCAAAT CTAGGCTACG ACAATCTCGA TTATGACTGG
GATATGAACC AAAACACTCC TTTACGTTCA ACGATTCAAC CTTGGTCAAC CATACATCAA
TACAGTGCTG GTTTATCGTT ATCTTATCGT CTTGATGATC ATTGGATGTT CCTTATAGCA
CCCAAACTGC AATACGCCTA TGCCGATACA GCGTCATCTT CAAATGCGCA AAGTTATGGT
GTCGTTGCCT CGGGCATGTA CCGCTTTGAT TCCGGCAATA TGCTGGGCTT TGGTGTTGCC
TATTTAAATG ATATTTCAGA AGTACGCACC GTACCTTATT TAGCCGTACG TTGGCAGATA
AACGATAAGT GGGTACTTGC TAACCCGTTC CAAGCTGGTT TTAGTGGTCC TGCAGGATTA
GAGTTAAGTT ATCAGTATAA CCGTGACTGG AATTTCGGTG TGGGTAGCTC AAAGCGAACA
GAACGTTTTT TAATTGCAGA CGATGACAAA ACCATTGAAG TAGAAGAATG GGTAGGCTTT
GCTCGCGCAG GCTGGCAAGC AACGACTAAT GTTAGTCTTA ATGCGTATGC TGGTTATTAT
TTTGGTGGCG AAATGGAGTT AAGTTATCCG GATGTTACTG AAGATATGGA AAACCAAGCC
GCATTCGGTT TAGTGTTCAA ACTGACGTTT TAA
 
Protein sequence
MTLYNVNVIQ PKSLSTSALS ILLASGLLLS QHALAAPERS PFSLTVARTS TGTANVGADS 
NNPNQLQRDA WKTSFSASMP LNRQWSIGAN LGYDNLDYDW DMNQNTPLRS TIQPWSTIHQ
YSAGLSLSYR LDDHWMFLIA PKLQYAYADT ASSSNAQSYG VVASGMYRFD SGNMLGFGVA
YLNDISEVRT VPYLAVRWQI NDKWVLANPF QAGFSGPAGL ELSYQYNRDW NFGVGSSKRT
ERFLIADDDK TIEVEEWVGF ARAGWQATTN VSLNAYAGYY FGGEMELSYP DVTEDMENQA
AFGLVFKLTF