Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1143 |
Symbol | |
ID | 4278044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1349970 |
End bp | 1351109 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133917 |
Product | cytochrome d ubiquinol oxidase, subunit II |
Protein accession | YP_749834 |
Protein GI | 114562321 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.702267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATT ATGAAGTATT AAGATTTATT TGGTGGGCGT TAATCGGCGT GCTGTTTATT GGTTTCACCG TGACAGATGG CTTTGATATG GGCGTAGGTA TATTGTTACC CGTTATTGGT AAAGATGATA CTGAACGCCG TATTATGATT AACACTATCG CACCACATTG GGACGGTAAC CAAGTATGGC TAGTGACGGC TGGTGGCGCG TTATTTGCTG CTTGGCCTAT GGTCTACGCG GTATCGTTTT CAGGCTTTTA TGTGGCAATG ATGCTAGTGC TATTTGCATT GTTTTTACGT CCAGTCGGTT TTGATTATCG CTCTAAAATT GAAGACCCAA GATGGCGTAA GTCATGGGAT AGAGCATTAT TTGTCGGCAG TTTTGTGCCA CCGTTAATCA TTGGTGTGGC ATTTGGTAAC CTGCTTCAAG GCGTACCATT TAACTTTGAT GAATATCTAC GTGCTACTTA TCATGGCGGT CTGTTGGGTT TATTGAATCC GTTTGGTTTA TTAGTCGGTC TTGTGAGTGT CACTATGGTG ATAATGCAAG GTTCTACATG GTTACAAATG AAGACCGACG GAGAGCTGCG GGTTAGAAGT GCTAAAGTAT CGCAAGTTTG TGGTGGTTTA TTAGTGGTTC TATTTGGTGC AGCTGGTGTT TGGCTTGTAA ACGGTATTGA TGGTTATGTT ATTACCTCAG CCCTTGACCT TGCTGGTCCG TCAAATCCAA CCACTAAGAC TGTAGCGGTT GAAGCGGGCG CTTGGTTAAC TAACTATGAT AAATATCCTC TTACCATGCT ATTCCCGGTA TTAGGGTTAT TAATGCCAAT ATTAGTGATT TTTGCCAGTC GATTAAATCG TAGTGGATTT GCGTTCTTTT TCAGTTCGCT AGCGGTTGCT TGTGTCATTT TGACCTGTGG AGCAGCAATG TTCCCATTTG TTATGCCTTC ATCATTAGAA CCTAATGTCA GCTTAACAAT GTGGGATGCT ACAGCCAGTC AAATGTCACT TAAAGTGATG ACAGTTGCCG CTATTATCTT CGTACCCACA GTATTAAGTT ACACCATTTG GACTTACTAC AAGATGTACG GCCGCTTAAA TCGTGAGTTT GTTGAAAACA ACAAAAGCTC ACTTTACTAA
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Protein sequence | MFDYEVLRFI WWALIGVLFI GFTVTDGFDM GVGILLPVIG KDDTERRIMI NTIAPHWDGN QVWLVTAGGA LFAAWPMVYA VSFSGFYVAM MLVLFALFLR PVGFDYRSKI EDPRWRKSWD RALFVGSFVP PLIIGVAFGN LLQGVPFNFD EYLRATYHGG LLGLLNPFGL LVGLVSVTMV IMQGSTWLQM KTDGELRVRS AKVSQVCGGL LVVLFGAAGV WLVNGIDGYV ITSALDLAGP SNPTTKTVAV EAGAWLTNYD KYPLTMLFPV LGLLMPILVI FASRLNRSGF AFFFSSLAVA CVILTCGAAM FPFVMPSSLE PNVSLTMWDA TASQMSLKVM TVAAIIFVPT VLSYTIWTYY KMYGRLNREF VENNKSSLY
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