| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1141 |
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| Symbol | |
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| ID | 4278042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1343377 |
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| End bp | 1347258 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133915 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_749832 |
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| Protein GI | 114562319 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA TTCGCGGAGC CCCAGCACTA TCTGCATTTA GAGTTCAAAA ACTCATGGAG
GCTTGCGAAA ACGCAGCGCT TCCTGTTTCT CAAATTTATG CTGAATATGT ACATTTAGCC
AGTTTGAGTG AACCACTAGA TGATAATGAA CGTCTACAGT TAGAAACTAT TCTTACTTAT
GGCCCAGCTA TTGAGTCTCA TGCCCCACAA GGCACTTTAC TGTTTGTTAC TCCTCGTCCT
GGCACTATTT CTCCTTGGTC TTCTAAAGCA ACCGACATTG CTCATAACTG TGGTTTAGGC
AAAGTTAGCC GTCTTGAACG TGGTATTGCT TATTATGTTG AAGCGTCAGT ATTAACCGCA
GAACAACAAA AACTACTGCA AGGGTTATTA CATGACCGTA TGGTCGAAGT GATGCTGCCA
GCGTTTGAAG CTGCTGAAGT ATTATTTGCT CGTACAGAAC CGGCAAAATT TAGCAGTGTG
AATATTCTTG CTGAAGGCCG CCGCGCATTA GAAGTGGCCA ACATTAAGCT AGGCTTGGCC
CTTGCCGATG ATGAGATTGA CTATTTAATT GAAAATTTTG TTCGTTTAAA GCGTAACCCT
AACGACATCG AATTAATGAT GTTTGCTCAA GCAAACTCGG AACATTGTCG CCACAAAATT
TTCAATGCAG ATTGGACAAT CGATGGTGAA GTACAGCTAA AGTCATTGTT CAAAATGATT
AAAAACACCT TTGAAGTGAC ACCTGATTAC GTGTTATCAG CTTACAAAGA TAATGCTGCG
GTGATGACAG GTTCTGTTGC GGGACGTTTT TTCCCTGATC CCGATGGTAT TTACAACTAT
CACACCGAGC CAATGCATAT ATTGATGAAA GTCGAAACGC ACAATCATCC TACTGCAATT
AGTCCATATC CTGGTGCGGC TACTGGCTCA GGTGGTGAAA TTCGCGATGA GGGTGCTACT
GGCCGAGGTT CTAAACCTAA AGCAGGTTTG TCTGGCTTTA CTGTTTCTAA CTTAAAAATT
CCTGGTTTTG TACAACCATG GGAAGGGGAT TACGGTAAGC CAGATCGTAT TGTCACACCG
TTAGAAATTA TGCTCGAAGG CCCACTTGGC GGCGCAGCAT TTAACAACGA ATTTGGTCGT
CCTGCCATTA CCGGTTATTT CCGCACCTAC GAGCAATTAG TCTCTAGCCA TAATGGTGTT
GAAGTACGCG GATATCATAA GCCGATTATG ATTGCTGGTG GCTTAGGCAA TATCCGTGAA
GATCATGTTC AAAAAGGCGA AATTACCATT GGTGCTAAGC TCATTGTGCT TGGCGGACCG
GCAATGAACA TTGGCTTAGG CGGTGGTGCT GCATCTTCAA TGGCATCTGG TCAATCTAGC
GAAGATTTAG ATTTTGCTTC TGTACAACGT GAAAACCCAG AAATGGAACG TCGTTGTCAG
GAAGTTATCG ATCGCTGTTG GCAATTAGGT GACACAAACC CAATTCAATT TATTCACGAT
GTGGGCGCAG GCGGATTATC TAATGCATTC CCTGAGTTAG TGAATGATGC TGATCGCGGC
GGGGTATTCA ATTTACGTAA TGTTCCCTCA GACGAGCCAG GCATGAGCCC GCTTGAAATT
TGGTGTAATG AATCACAAGA ACGTTATGTA TTATCGGTTG CACCAGAGAA CTTGCAACAG
TTTGCTGATA TTTGTGCCCG TGAACGCGCG CCATTTGCCG TGGTTGGTGA AGCGACAGCA
GAGATGCATT TAACGCTTGC CGACAGCCAT TTTAACAACA AGCCGATTGA TTTACCGCTT
GAAGTTTTAT TGGGTAAAGC GCCTAAGATG AGCCGTGATG TGGTAACTGC CAAAGCAGTA
TCGCCAGCGT TAGATCAAAC TAAAATTGAG CTAAAAGATG CTGTTAAGCG CATTTTAACC
TTGCCAACAG TGGCAGACAA AACCTTCCTT ATCACCATTG GTGATCGCTC CGTTACTGGT
TTAGTGAATC GCGATCAAAT GGTGGGTCCA TGGCAGGTTC CAGTTGCCGA CTGCGCAGTA
ACCGCATCAA GTTATGACAG TTACTGCGGT GAAGCGATGT CGATGGGTGA GCGTACTCCG
TTAGCCTTAC TCGACTTTGA CGCCTCAGCC CGCATGGCGG TTGCCGAATC GATTATGAAC
ATTGCTGGTA CTGACATTGG CTCGTTCAAG CGTATTAAGC TTTCTGCTAA CTGGATGTCT
CCAGCGGGTC ACCCTGGTGA AGATGCGGGT TTATACCAAG CCGTTAAAGC GATTGGTGAA
GACCTTTGTC CTGAACTTGG TATAACAATT CCTGTTGGCA AAGACTCCAT GTCGATGAAA
ACCGCATGGG AAGATAACGG CACTCAGAAA ACCGTCACAT CGCCTATGTC GTTAGTCATC
ACTGCCTTTG GTGTAGTACA AGACATTCGT AAAACGGTAA CGCCACAGCT TCGCAGTGAT
AAAGGTGATA GTGCTTTATT AATGCTGGAC CTAAGCAATG GCCAAAACCG TTTAGGCGGT
TCTTGTTTAG CGCAGGTTTA CAGTGAGTTA GGTGACATTG CACCAACATT GGATAAAACC
GCTAACTTAG CTGGCTTTTT TGAAGTGATG CAGCAACTCG TAGCCGATCA AGCGGTTATG
GCTTATCACG ATCGTAGTGA TGGCGGTTTA TTTACCACTC TCGTGGAAAT GGCTTTTGCT
GGTAATACCG GGTTAACAAT TGATTTAGCC AGCTTGAGTG GTACTGATTT AGAACGTTTA
TTTAACGAAG AAATTGGTGC TGTAATTCAA GTCAGTGCTA TTGATGCTAA AGCCATTGCC
GCGCAATTTG AAGCTAAAGG CGTAACGTGT CATCACATCG GTGGTTTGCA AACGGCTGAC
AAAATTAGCA TTAATGACGG CGAGCGAGTC ATATTTGCTG ACAGCCGTAC TGCACTGCGT
ACCTTATGGT CAGAAACAAC CTATCGCATG CAAGCGCTAC GTGACAATCC GGAATGTGCG
CGTGAAGAAT ATGAGCTTAA ACAACAAGCT GATGCGCCAG GTTTAACGGT TAAATTAGGC
TTTAATCCAA GTGAAGATGT CGCCGCACCT TATATCCTTA AAGGTGTCGC ACCTAAAATG
GCTATTTTAC GTGAGCAAGG CGTTAACTCT CATGTTGAAA TGGCAGCCGC TTTTGACCGT
GCCGGTTTTG AAAGTCGCGA CGTGCACATG TCGGACATTT TATCTGGTCG AATTAGTTTA
GAAGAATTCC AAGGCCTAGT GGCATGTGGC GGCTTCTCTT ACGGTGACGT GTTAGGCGCT
GGTGAAGGTT GGGCTAAATC GATTTTGTTT AATGATCGTG CTCGCGACGA GTTTAGCCGT
TTCTTCGAAC GTGATTCAAG CATCGCCCTT GGCGTGTGTA ATGGTTGTCA GATGTTATCT
AACCTGAAAG AAATTATTCC AGGAAGTGAG CATTGGCCAC GTTTTGTGCG TAACCGTTCT
GAGCGTTTTG AAGCTCGATT CAGTTTGGTT GAAGTGCAAC AAAATCCATC GGTATTTTTT
GAAGGCATGG TCGGTTCTCG TATGCCTATC GCAGTATCGC ATGGTGAAGG CTTAGTTGAA
TTTGCCAATG CTCAAGCGTT AGCAAATGCA GAAGCATCGG GCACTATTGC ACTGCGCTAT
GTTGATGGTC ATGGTCAAAT TGCGACCCAG TACCCAGAAA ACCCAAATGG TTCTGCTAAT
GGCTTAACTG GTATCTGTAC CACTGATGGT CGCGTAACAA TTATGATGCC GCATCCTGAG
CGTGTATTCA GAACCGTTGC CAATTCATGG CATCCAGATA ATTGGGGTGA AGATAGCCCA
TGGATGCGTA TGTTCCGTAA TGCACGAGTG AAGATTGGTT AA
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| Protein sequence | MEIIRGAPAL SAFRVQKLME ACENAALPVS QIYAEYVHLA SLSEPLDDNE RLQLETILTY
GPAIESHAPQ GTLLFVTPRP GTISPWSSKA TDIAHNCGLG KVSRLERGIA YYVEASVLTA
EQQKLLQGLL HDRMVEVMLP AFEAAEVLFA RTEPAKFSSV NILAEGRRAL EVANIKLGLA
LADDEIDYLI ENFVRLKRNP NDIELMMFAQ ANSEHCRHKI FNADWTIDGE VQLKSLFKMI
KNTFEVTPDY VLSAYKDNAA VMTGSVAGRF FPDPDGIYNY HTEPMHILMK VETHNHPTAI
SPYPGAATGS GGEIRDEGAT GRGSKPKAGL SGFTVSNLKI PGFVQPWEGD YGKPDRIVTP
LEIMLEGPLG GAAFNNEFGR PAITGYFRTY EQLVSSHNGV EVRGYHKPIM IAGGLGNIRE
DHVQKGEITI GAKLIVLGGP AMNIGLGGGA ASSMASGQSS EDLDFASVQR ENPEMERRCQ
EVIDRCWQLG DTNPIQFIHD VGAGGLSNAF PELVNDADRG GVFNLRNVPS DEPGMSPLEI
WCNESQERYV LSVAPENLQQ FADICARERA PFAVVGEATA EMHLTLADSH FNNKPIDLPL
EVLLGKAPKM SRDVVTAKAV SPALDQTKIE LKDAVKRILT LPTVADKTFL ITIGDRSVTG
LVNRDQMVGP WQVPVADCAV TASSYDSYCG EAMSMGERTP LALLDFDASA RMAVAESIMN
IAGTDIGSFK RIKLSANWMS PAGHPGEDAG LYQAVKAIGE DLCPELGITI PVGKDSMSMK
TAWEDNGTQK TVTSPMSLVI TAFGVVQDIR KTVTPQLRSD KGDSALLMLD LSNGQNRLGG
SCLAQVYSEL GDIAPTLDKT ANLAGFFEVM QQLVADQAVM AYHDRSDGGL FTTLVEMAFA
GNTGLTIDLA SLSGTDLERL FNEEIGAVIQ VSAIDAKAIA AQFEAKGVTC HHIGGLQTAD
KISINDGERV IFADSRTALR TLWSETTYRM QALRDNPECA REEYELKQQA DAPGLTVKLG
FNPSEDVAAP YILKGVAPKM AILREQGVNS HVEMAAAFDR AGFESRDVHM SDILSGRISL
EEFQGLVACG GFSYGDVLGA GEGWAKSILF NDRARDEFSR FFERDSSIAL GVCNGCQMLS
NLKEIIPGSE HWPRFVRNRS ERFEARFSLV EVQQNPSVFF EGMVGSRMPI AVSHGEGLVE
FANAQALANA EASGTIALRY VDGHGQIATQ YPENPNGSAN GLTGICTTDG RVTIMMPHPE
RVFRTVANSW HPDNWGEDSP WMRMFRNARV KIG
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