| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1138 |
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| Symbol | guaA |
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| ID | 4278039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1339029 |
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| End bp | 1340606 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133912 |
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| Product | GMP synthase |
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| Protein accession | YP_749829 |
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| Protein GI | 114562316 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
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| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.045866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA TTCACGATCA TAAGATTCTA ATCCTCGATT TTGGTTCTCA GTACACTCAA
CTTATTGCGC GTCGTATCCG TGAAATTGGT GTGTATTGTG AGTTATGGGC GTGGGATGTG
AGCGAAGCGC AAATTCGTGA GTTTGCCCCA AATGGTATTA TTTTGGCTGG TGGCCCTGAA
AGTGTCACTG CAGACAATTC ACCACGTGCT CCAGAGTATG TGTTTAATGC TGGTGTGCCT
GTATTGGGTA TTTGTTACGG CATGCAAACC ATGTCAGAAC AGCTTGGTGG CAAAGTGATT
CAAGGCGTGG GTGAAGGTGA GTTTGGTTAC GCACAAATTG AATTACAAAC CACATCTGCT
TTGTTTAAAA GCATTGAAGA TGCAGTAAGC GCAGAAGGCA AACCTTTGCT CGATGTGTGG
ATGAGCCACG GTGATAAAGT GTCTGCTATC CCTGACGGTT TTGTGACGGT AGCGAAAACG
GCAACTTGTC CGTTTGCCGC TATGGCCAAT GAAGAGAAAG GTTTTTACGG CGTACAGTTC
CACCCTGAAG TGACTCACAC TCGCCAAGGT CAGCGTATGC TAGAGCATTT CGCGTTAGAC
ATTTGTGGCT GTAAAGCCAA TTGGAAGCCA TCATCAATTA TTGAAGATGC TATTGAGCGT
TTAAAAAAGC AAATTGGTGA TGACGAAGTT ATTCTGGGTT TATCTGGCGG GGTAGATTCA
TCGGTTGTGG CGATGCTATT ACATCGGGCG ATTGGCGATA AACTAACGTG TGTATTTGTT
GATAACGGTT TACTGCGTTT GAACGAAGCC GAGCAAGTAT TAGAAATGTT TGGCGATCAT
TTTGGACTCA ATATTGTTCA CGTTGATGCT GAAAACCGTT TCTTAGATGC AATGGCTGGC
GAAGCAGAAC CTGAAGCGAA GCGTAAAATC ATTGGTCGTG TGTTTGTCGA AATTTTTGAT
GAAGAATCAA AAAAATGCGC GAATGCTAAA TGGCTAGCCC AAGGCACTAT TTATCCTGAT
GTGATTGAAT CAGCGGGCAG TGCAACCGGT AAAGCACATG TGATTAAGTC GCACCACAAT
GTTGGCGGTT TACCTGCCGA TATGAAGATG GGTTTAGTTG AACCACTACG TGAGTTATTT
AAAGATGAAG TGCGTAAAAT TGGTTTAGAG TTAGGCCTGC CTTACAACAT GCTTTATCGT
CATCCGTTCC CAGGACCAGG TTTAGGTGTT CGTGTACTTG GCGAAGTGAA AAAAGAATAT
TGTGATTTAC TGCGAAGTGC AGACGCTATC TTTATTGAAG AGCTACACAA AGCTGATTTG
TATAATAAAG TGAGCCAAGC CTTTACCGTT TTCTTACCCG TTCGTTCGGT AGGTGTAATG
GGTGATGGTC GTAAGTATGA TTGGGTTGTA TCGCTACGTG CGGTAGAAAC TATCGACTTT
ATGACCGCAC ATTGGGCACA TTTGCCGTAT GATTTCTTAG GCCGCGTTTC TAACCGTATT
ATCAATGAAG TCGATGGTAT TTCTCGTGTG GTTTATGATA TTTCAGGTAA GCCGCCTGCA
ACAATTGAAT GGGAATAA
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| Protein sequence | MSNIHDHKIL ILDFGSQYTQ LIARRIREIG VYCELWAWDV SEAQIREFAP NGIILAGGPE
SVTADNSPRA PEYVFNAGVP VLGICYGMQT MSEQLGGKVI QGVGEGEFGY AQIELQTTSA
LFKSIEDAVS AEGKPLLDVW MSHGDKVSAI PDGFVTVAKT ATCPFAAMAN EEKGFYGVQF
HPEVTHTRQG QRMLEHFALD ICGCKANWKP SSIIEDAIER LKKQIGDDEV ILGLSGGVDS
SVVAMLLHRA IGDKLTCVFV DNGLLRLNEA EQVLEMFGDH FGLNIVHVDA ENRFLDAMAG
EAEPEAKRKI IGRVFVEIFD EESKKCANAK WLAQGTIYPD VIESAGSATG KAHVIKSHHN
VGGLPADMKM GLVEPLRELF KDEVRKIGLE LGLPYNMLYR HPFPGPGLGV RVLGEVKKEY
CDLLRSADAI FIEELHKADL YNKVSQAFTV FLPVRSVGVM GDGRKYDWVV SLRAVETIDF
MTAHWAHLPY DFLGRVSNRI INEVDGISRV VYDISGKPPA TIEWE
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