| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1137 |
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| Symbol | |
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| ID | 4278038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1337458 |
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| End bp | 1338924 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133911 |
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| Product | inosine 5'-monophosphate dehydrogenase |
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| Protein accession | YP_749828 |
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| Protein GI | 114562315 |
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| COG category | [F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0516] IMP dehydrogenase/GMP reductase
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00151864 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTACGTT TACTGAAAGA TGCACTAACC TTTGATGATG TGTTGTTGGT TCCTGCCCAC
TCGACCGTAC TCCCTAATAC CGCTGTTCTT AAAACTCGTT TAACGACTAA AATCGAATTA
AATATTCCAC TTGTGTCAGC CGCCATGGAC ACTGTGACTG AATCTCGTCT TGCGATCGCG
ATGGCGCAAG AAGGTGGTTT AGGATTCATT CATAAAAACA TGAGTATTGA GCAACAAGCT
GAAGAAGTCC GTAAAGTTAA AAGTTATGAA GCCGGTATTG TTCAAGACCC CGTTACTGTT
ACGCCTACCA CAAGCTTAAC TGATTTACGT TTATTAACTG AACATAATGG TTTTGCTGGT
TACCCTGTAG TGAATGATGC ACACGAACTT GTGGGTATTA TTACAGGCCG TGATGTGCGT
TTTGTGACTG ATTGGAGCAA AACCGTTGCC GACATGATGA CCCCAAAAGA TCGTCTAGTC
ACAGTAACTG AAGGTACTAA GTTAGATGAA GTGCAAAAAC TAATGCATTC TCATCGTATT
GAAAAAGTCT TAGTGGTTGA TAAAAACTTT AAACTTAAAG GCTTAGTCAC CGTTAAAGAT
TTCGAAAAAG CTGAACGCAA ACCAAACGCA TGTAAAGACG AATTAGGTCG TTTACGTGTT
GGCGCAGCCG TCGGTGCTGG TCCTGGCAAT GAAGAACGTG TTGACGCGCT CGTAAAAGCC
GGTGTTGACG TGTTATTGAT TGACTCATCA CATGGTCACT CAGAAGGCGT ATTGCAGCGC
ATTCGTGACA CTAGAGCCAA ATACCCTGAT TTGCAAATTG TTGGCGGCAA CGTTGCCACC
GCATCTGGCG CACTTGCGCT AGTTGAAGCG GGCGTTAACG CCGTTAAAGT CGGTATCGGC
CCTGGTTCAA TTTGTACTAC TCGTATTGTA ACGGGTGTCG GTGTACCACA AATCACTGCG
GTATCTGATG CTGCTGAAGC CGTACTCGCG TTAGGCATTC CTGTTATTGC TGATGGCGGT
ATTCGTTTTT CTGGCGACTT AGCTAAAGCA TTAGCTGCAG GTGCATCATG CATCATGGCG
GGTTCTATGT TTGCTGGTAC TGAAGAAGCG CCAGGTGAAA CTGAACTTTA CCAAGGTCGT
GCTTATAAAT CATACCGTGG TATGGGATCT CTGGGTGCTA TGGGCCAAAC TCAAGGTTCA
TCTGACCGTT ACTTCCAAAG TGACAACGCA GCAGACAAAT TAGTACCTGA AGGTGTTGAA
GGTCGCGTGC CGTACAAAGG TAAGTTGAAA GAGATCATTC ACCAACACAT GGGCGGCTTG
CGTTCATGCA TGGGCTTAAC CGGTTGTGCC ACGATTAAAG AGTTAAATGA AAAAGCACAG
TTTGTAAGAG TGACTTCAGC AGGTATGGGT GAGTCACACG TTCATGACGT GACCATTACC
AAAGAAGCAC CAAACTATCG TTCATAA
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| Protein sequence | MLRLLKDALT FDDVLLVPAH STVLPNTAVL KTRLTTKIEL NIPLVSAAMD TVTESRLAIA
MAQEGGLGFI HKNMSIEQQA EEVRKVKSYE AGIVQDPVTV TPTTSLTDLR LLTEHNGFAG
YPVVNDAHEL VGIITGRDVR FVTDWSKTVA DMMTPKDRLV TVTEGTKLDE VQKLMHSHRI
EKVLVVDKNF KLKGLVTVKD FEKAERKPNA CKDELGRLRV GAAVGAGPGN EERVDALVKA
GVDVLLIDSS HGHSEGVLQR IRDTRAKYPD LQIVGGNVAT ASGALALVEA GVNAVKVGIG
PGSICTTRIV TGVGVPQITA VSDAAEAVLA LGIPVIADGG IRFSGDLAKA LAAGASCIMA
GSMFAGTEEA PGETELYQGR AYKSYRGMGS LGAMGQTQGS SDRYFQSDNA ADKLVPEGVE
GRVPYKGKLK EIIHQHMGGL RSCMGLTGCA TIKELNEKAQ FVRVTSAGMG ESHVHDVTIT
KEAPNYRS
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