| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1135 |
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| Symbol | |
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| ID | 4278036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1335069 |
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| End bp | 1335746 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133909 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_749826 |
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| Protein GI | 114562313 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00317388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGTAA AGTTAAATGC ATCGTTGTTA TGCAGTTCAT TAATTGGTTC GGCGCTGTTG
TTGTCAGGTT GCCAGTTACC TAATCCTTAT ACGGGCGAAT CAGAAAATGC TAAAGCGACA
AATGGCGCTA TTATCGGTGG CCTTTCTGGC GCTGCCATTG GTGTGCTTTC ATCAAGCAAA
AGCGATCGCG GTAAAGGTGC ATTAATTGGT GCAGCATCTG GTGCGGCTCT TGGTGGTGGT
ATTGGTTATT ACATGGATGT GCAAGAAGCA GAATTGCGTA AACAGTTAAA ATCAACTGGC
GTGAGTGTGA CGCGCAACGG TGACAATATT GTATTGAACA TGCCTAATGA AGTGACTTTT
GCGGTTGATC AAACTGTACT AAGCTCACGT GCTAAATCAG TATTAAACAG CGTTGTATTA
GTTGCCAAAG AATATGATGA CACTCGTTTA AATGTGATTG GTTATACCGA CAGTTCAGGT
TCAGATTCTT ATAACCTGCG TTTGTCACAA GTTCGAGCGA GTGAAGTTGC GCAGTATATG
ACGAGCCAGA AAGTCAGCGG TTCACGTGTG TCTTCTACTG GTATGGGCGA GTCAAGCCCA
ATTGCCAGCA ACTCTACCGA ACAAGGTCGT TCGCAAAACC GTCGTGTAGA AATTGTATTA
ACACCAATGG GTAAGTAG
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| Protein sequence | MLVKLNASLL CSSLIGSALL LSGCQLPNPY TGESENAKAT NGAIIGGLSG AAIGVLSSSK
SDRGKGALIG AASGAALGGG IGYYMDVQEA ELRKQLKSTG VSVTRNGDNI VLNMPNEVTF
AVDQTVLSSR AKSVLNSVVL VAKEYDDTRL NVIGYTDSSG SDSYNLRLSQ VRASEVAQYM
TSQKVSGSRV SSTGMGESSP IASNSTEQGR SQNRRVEIVL TPMGK
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