| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1129 |
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| Symbol | |
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| ID | 4277050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1328158 |
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| End bp | 1329561 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133903 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_749820 |
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| Protein GI | 114562307 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.983019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAT TACGATTATT ATTAAGTTTG ATTATGCTGG TAGGGATTGT TCTCACGGTA
ACTTTTTCGA GCATACTCAG TACCCGCGAT GCTATGCATG AAGTCGAAGA ATTGTTTGAT
GCGCAGATGG TGCAAACCGC CAAAATGTTG GAACAGTTTT ATGTCGAACA TTTAACAGAA
GCTCAACTGG CACAATTGCT CCAGCAGCCA AGTTTGTTCC ATGTTGCGGA TTCAAAGATA
GAAACCTTTG CAGAACAATC GAATCCTGTC ACTTTGTCTT ATGAGCATAA ATTATCATTT
CAATTACTGT CCAGCTCGGG ACAGTTACTC GCGTACTCTG ATAGCACTGG CGAACAACAA
TTAACCAATT TCACTCAAGG TTATGATATT CATCGAATCG ATGATGAGTT ATGGCATGTA
TACAGCTTTT TCTCATCGCC GCATCAAGTA TGGATTGTGA CTGCGCAACG TGATGATGTT
CGGCAAGAAT TAGTCTCATT AATCATCAGC AACACCTGGC GCTCGCCATT AATGATTACC
CCCATTATGG TATTTTTTAT GTTAGTGCTG ACTTATTTCT TATTTAAACC AGTTAAATTA
TTAGAACGTC ACCTAGCTAA CCGCTCAGCC CAAGACCTAA CCCCTATCAA TTTCACTTTA
CCGACAGAGT TAGCGTCAAC ACAAAAAGCC CTTAATAGCT ATTTGCTGCG CATTAGCGAG
ACGATGATCC GTGAACGTCG CTTTAGTGCC GATGCAGCCC ATGAACTTAA AACGCCATTA
GCGATTATTA AGTTACACAG CGACGGCTTA AGCGATGTAT TGTCTAGCCA AACACCAGAG
ATCCAGCAGA CAACTTTGCC GTATATAGAA GCCATAGGCG AGGGCGTAAA CCGCATTAGC
CATACTGTAG AGCAGCTGTT GTTATTATCA CGCGTTGATG CCATTGAGGC GTTAAATAAA
ACCGATTGTA AGCTGCAAGA TGTTATTGAG AATGTGATAA ATCAGCTAGT ACACATCATT
GCCGATTACG AGTGGTATAT CGTTGTTCCT AAAGATATGA CCATCAATGC CGATCCGTTT
TACATTGAAT TGGTACTGAA AAATATTATC GAAAATGCTT GCAAATATAG CCCTATAGAA
TCATTAATTA CCATTACGGT TACTCAGGAC GAGCAGCAGA CGATGATTTG TGTACTTGAT
CAAGGCAAGG GAATGTCTGA TGAAGAAATT AGCTTAGCCA AAAATCGCTT TTATCGAGTT
GATGAAAACG CTTCACACGG TGCCGGTTTA GGCTTGTCGA TTTGCCAGCA TATTATCAGT
TTACATCATG GTGAATTGAC TTTTAGCAAA GTAGAACCTC ATGGCTTAAA TGTTTGTATC
GTCTTACCTC ATGCTCAGAT TTAG
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| Protein sequence | MFSLRLLLSL IMLVGIVLTV TFSSILSTRD AMHEVEELFD AQMVQTAKML EQFYVEHLTE
AQLAQLLQQP SLFHVADSKI ETFAEQSNPV TLSYEHKLSF QLLSSSGQLL AYSDSTGEQQ
LTNFTQGYDI HRIDDELWHV YSFFSSPHQV WIVTAQRDDV RQELVSLIIS NTWRSPLMIT
PIMVFFMLVL TYFLFKPVKL LERHLANRSA QDLTPINFTL PTELASTQKA LNSYLLRISE
TMIRERRFSA DAAHELKTPL AIIKLHSDGL SDVLSSQTPE IQQTTLPYIE AIGEGVNRIS
HTVEQLLLLS RVDAIEALNK TDCKLQDVIE NVINQLVHII ADYEWYIVVP KDMTINADPF
YIELVLKNII ENACKYSPIE SLITITVTQD EQQTMICVLD QGKGMSDEEI SLAKNRFYRV
DENASHGAGL GLSICQHIIS LHHGELTFSK VEPHGLNVCI VLPHAQI
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