| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1128 |
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| Symbol | |
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| ID | 4277049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1327412 |
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| End bp | 1328071 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133902 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_749819 |
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| Protein GI | 114562306 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.40399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAGTGT TATTAGTAGA AGATAATAAG CTGTTAGCAC AAGGCATCGT GATGAGTTTA
GCTAAATCAG GTATTCAGGT CGATCATTTA GCATCATATA ATCAAGCTCA AATCGCTTTA
GAAAATGAAG ATTTTAGCGC CATTATTCTC GATTTAAGTT TACCCGATGG CAATGGTGCG
GACTTATTAA AACAGTGGCG TAAAAATGGT ATCTCGTTAC CTATAATTGT GTTGACCGCA
AATACAGATT TTGACACCCG CTTAATGTGT TTAGATATTG GTGCAGATGA TTATTTAAGT
AAGCCTTTTG ATGTAAGGGA ATTAATTGCG AGGCTTAAAG CGATTATTCG ACGTCAGCAT
GGCCTAGATA ATAACCAATT CAGTTATGGT GCACTCAATA TTGATTTTGC CCGCTGTGAA
GTTCATTTTC GCGATGAGTT AGTGTCGCTT TCACGTCGTG AATATCAATT ATTACTCGAA
TTTGCTCAAT CAGCAGGCCG CGTGTTAACC CGTAATCAAC TTGAACAGTT AACTTATGGC
TGGGATGAAG TTGGCAGCAA CTCTATTGAA GTGCATATTC ATCATTTACG TAAAAAAACC
GCCACTGAAT TGATCAAAAC CGTGCGTGGT ATAGGCTATA TATTAACTGA AACGGTATAG
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| Protein sequence | MRVLLVEDNK LLAQGIVMSL AKSGIQVDHL ASYNQAQIAL ENEDFSAIIL DLSLPDGNGA
DLLKQWRKNG ISLPIIVLTA NTDFDTRLMC LDIGADDYLS KPFDVRELIA RLKAIIRRQH
GLDNNQFSYG ALNIDFARCE VHFRDELVSL SRREYQLLLE FAQSAGRVLT RNQLEQLTYG
WDEVGSNSIE VHIHHLRKKT ATELIKTVRG IGYILTETV
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