Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1126 |
Symbol | |
ID | 4277047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1325144 |
End bp | 1326442 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133900 |
Product | hypothetical protein |
Protein accession | YP_749817 |
Protein GI | 114562304 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0557834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACTAA CATCTAAGCA AAGTATTGCC AGTGCGTTGG CATTGGCAAG CTGTAGTTTG TTGAGCCAAC AGGCCAGTGC TGCAGAACCT ATTCCTGCCA CTGATGATTG GAAGGTCGAT GCTGCCATTA TGTATTATGG TGAGCAAGAC CGTGTTCAAG CCGCAGAAGC GATTGGTAAT GTACAAAAAG CCTTTGGTGA TAGTTCGTTA TTGGACCTTA AAATTGTGGT CGACAGTTTA ACTGGTGCAT CAGCTTCTGG TGCAGTGGCC CAAAGTGACA GTCAGACTTT CACGCGTCCA TCGGGTGATG GCCAATACAC TGTTGCTGCT GGTGATACCC CGCTGGACGA TACCTTTCAT GATACTCGTG TTCAGCTAAG CGCTAATTGG CAAGAAGTGC TTAATCAAGA TTGGACTGGT AATATTGGCG TGTATGGTTC GAAAGAGTTT GATTATCTTT CAATGGGTAT TAATGGTGGT CTTGAGCGTA GTTTTAATAA AAATAACACA ACGTTGTCAT TGTCGGGTGC TTTTACCAAT GATGTAGTAG ATCCTGTTGG CGGCCGCCCA GTGGCAATGT CAGAAATGGT ATTTCGTGGT AATTATGCCA ACGATGCCGA TTATCAAGCA GCCTTCGATC AAACTCGTTT AGCGGACGAT GATACTAAAC AAACAAGCGA TATTATGTTT GGCGTGACTC AGATTATTAA TCGTAATTGG TTGATGCAAG CTAACTATGG TTTATCAAGT GTGTCAGGCT ACATGACTGA CCCGTACAAG ATCCTTAGTG AGGTCGATGT TAACGGTCAA ACACAAGCTT ACCGTTACGA AAATCGTCCA GATTCACGCC TTAAGCACAG TGTGTTTTTA CTTACTAAAG GCGCGCTGGA TTCAGGTGTA GTTGATTTTT CATATCGTTA CAGCACTGAT GATTGGGAAA TTCAATCGCA TACTTTAGAG ACCCATTATC GCTACTATTT TAGCCCAAGT ATGTACGGAC AATTACACTT GCGTTATTAC CAGCAGCAAG CCGCTGAGTT TTATCAACCA TTCTTAATGA GTGGCGATGC AATACCTGAG TATGCCAGCG CAGATTATCG CATTGGTGAT ATGACGGCTT ACACCATAGG GCTTAAATTT GGTCAGCGTT TATCGGGTGG CCATGAACTA AGTTATCGTA TTGAATATTA CCAGCAAAAT CCTGAAAATA ATGGCACAGA GATACCTGGT CAGCTACAAA ACTACGATTT ATTCCCAGCG GTGAAGGCGA TAGTAGCTCA AGTGAGTTAT TCGTTTTAA
|
Protein sequence | MQLTSKQSIA SALALASCSL LSQQASAAEP IPATDDWKVD AAIMYYGEQD RVQAAEAIGN VQKAFGDSSL LDLKIVVDSL TGASASGAVA QSDSQTFTRP SGDGQYTVAA GDTPLDDTFH DTRVQLSANW QEVLNQDWTG NIGVYGSKEF DYLSMGINGG LERSFNKNNT TLSLSGAFTN DVVDPVGGRP VAMSEMVFRG NYANDADYQA AFDQTRLADD DTKQTSDIMF GVTQIINRNW LMQANYGLSS VSGYMTDPYK ILSEVDVNGQ TQAYRYENRP DSRLKHSVFL LTKGALDSGV VDFSYRYSTD DWEIQSHTLE THYRYYFSPS MYGQLHLRYY QQQAAEFYQP FLMSGDAIPE YASADYRIGD MTAYTIGLKF GQRLSGGHEL SYRIEYYQQN PENNGTEIPG QLQNYDLFPA VKAIVAQVSY SF
|
| |