Gene Sfri_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1126 
Symbol 
ID4277047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1325144 
End bp1326442 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content43% 
IMG OID638133900 
Producthypothetical protein 
Protein accessionYP_749817 
Protein GI114562304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0557834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTAA CATCTAAGCA AAGTATTGCC AGTGCGTTGG CATTGGCAAG CTGTAGTTTG 
TTGAGCCAAC AGGCCAGTGC TGCAGAACCT ATTCCTGCCA CTGATGATTG GAAGGTCGAT
GCTGCCATTA TGTATTATGG TGAGCAAGAC CGTGTTCAAG CCGCAGAAGC GATTGGTAAT
GTACAAAAAG CCTTTGGTGA TAGTTCGTTA TTGGACCTTA AAATTGTGGT CGACAGTTTA
ACTGGTGCAT CAGCTTCTGG TGCAGTGGCC CAAAGTGACA GTCAGACTTT CACGCGTCCA
TCGGGTGATG GCCAATACAC TGTTGCTGCT GGTGATACCC CGCTGGACGA TACCTTTCAT
GATACTCGTG TTCAGCTAAG CGCTAATTGG CAAGAAGTGC TTAATCAAGA TTGGACTGGT
AATATTGGCG TGTATGGTTC GAAAGAGTTT GATTATCTTT CAATGGGTAT TAATGGTGGT
CTTGAGCGTA GTTTTAATAA AAATAACACA ACGTTGTCAT TGTCGGGTGC TTTTACCAAT
GATGTAGTAG ATCCTGTTGG CGGCCGCCCA GTGGCAATGT CAGAAATGGT ATTTCGTGGT
AATTATGCCA ACGATGCCGA TTATCAAGCA GCCTTCGATC AAACTCGTTT AGCGGACGAT
GATACTAAAC AAACAAGCGA TATTATGTTT GGCGTGACTC AGATTATTAA TCGTAATTGG
TTGATGCAAG CTAACTATGG TTTATCAAGT GTGTCAGGCT ACATGACTGA CCCGTACAAG
ATCCTTAGTG AGGTCGATGT TAACGGTCAA ACACAAGCTT ACCGTTACGA AAATCGTCCA
GATTCACGCC TTAAGCACAG TGTGTTTTTA CTTACTAAAG GCGCGCTGGA TTCAGGTGTA
GTTGATTTTT CATATCGTTA CAGCACTGAT GATTGGGAAA TTCAATCGCA TACTTTAGAG
ACCCATTATC GCTACTATTT TAGCCCAAGT ATGTACGGAC AATTACACTT GCGTTATTAC
CAGCAGCAAG CCGCTGAGTT TTATCAACCA TTCTTAATGA GTGGCGATGC AATACCTGAG
TATGCCAGCG CAGATTATCG CATTGGTGAT ATGACGGCTT ACACCATAGG GCTTAAATTT
GGTCAGCGTT TATCGGGTGG CCATGAACTA AGTTATCGTA TTGAATATTA CCAGCAAAAT
CCTGAAAATA ATGGCACAGA GATACCTGGT CAGCTACAAA ACTACGATTT ATTCCCAGCG
GTGAAGGCGA TAGTAGCTCA AGTGAGTTAT TCGTTTTAA
 
Protein sequence
MQLTSKQSIA SALALASCSL LSQQASAAEP IPATDDWKVD AAIMYYGEQD RVQAAEAIGN 
VQKAFGDSSL LDLKIVVDSL TGASASGAVA QSDSQTFTRP SGDGQYTVAA GDTPLDDTFH
DTRVQLSANW QEVLNQDWTG NIGVYGSKEF DYLSMGINGG LERSFNKNNT TLSLSGAFTN
DVVDPVGGRP VAMSEMVFRG NYANDADYQA AFDQTRLADD DTKQTSDIMF GVTQIINRNW
LMQANYGLSS VSGYMTDPYK ILSEVDVNGQ TQAYRYENRP DSRLKHSVFL LTKGALDSGV
VDFSYRYSTD DWEIQSHTLE THYRYYFSPS MYGQLHLRYY QQQAAEFYQP FLMSGDAIPE
YASADYRIGD MTAYTIGLKF GQRLSGGHEL SYRIEYYQQN PENNGTEIPG QLQNYDLFPA
VKAIVAQVSY SF