| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1119 |
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| Symbol | |
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| ID | 4277040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1319944 |
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| End bp | 1321179 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133893 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_749810 |
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| Protein GI | 114562297 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCGT GGTGTAAAAA TCTACTTGCC GTTGGGTTAA GTGTTGCTCT TATGTCTGCT
TGTTCTTCAA GTGATGTTGA AGAAGAGCCT GTGAGTGAAT TAGTTGATAT ACAAGCAACC
GTTTTTCCTG AGGTCACTTG GGATACCAGT GTCGGCGATG GTGTAGGCGA TTATTACTCG
CAACTTCGTC CTACCGTTCG TTACGGCAAG GTGTTTGTCG CCGATCGCAG CGGTATTGTG
GTTGCTTTTG ATGAAACAAC CGGTGATGAG CTTTGGAAGC AAGACTTCAA TGACGTCTTT
GAAGAGAAGC TTGAAACTAA AACCAAGGGG CTTCGTTTAG CAGCAGGTGT TACAGCTGCA
CGTAATAAAG TCTTTGTTGG TGGCGAAACG GGTTTATTGG TTGCGCTTGA CGAAGCAACC
GGTGACGTTG TGTGGTCTGC GCAAGCAAAT GGCGAGTTAT TATCGGCGCC GACAGTGGCA
GAAGATGTTG TTGCGGTAAA TACCAGTAAA GGCGCATTTG AAGCATTTAA TATCGATAAC
GGTAAAAAGT TATGGACCTA TGAAATGCAA CTGCCAAACC TGACTTTACG TGGTACTGGT
TCTGCAGCAT ATGAAGCGGG CGGTTTCTTT TTAGGTACAG CAGACGGTAA GGTGGCTGTT
GTCGTTAAAA GTAATGGTCA GGCTGCTTGG GAACAACCCG TCTTTAGTCC AACCGGCGCA
AATGAGTTCA CCCGGATGGC TGATATTGAT ATGACGCCAT TAGTACTGGG CGAAAATCTG
TATGTTGCTA GTTACAATGG TAACTTAGTG TCTATGGAAC TTCGTAGTGG TCGTGTTGTT
TGGTCGCGTA AATATTCAAG CTTTAATGAT TTAGCTGCTG CAGGTATTAG TCTGTATTTG
GTCGATGATC ATAGCCGAAT TTACTCAGTC GATCGCCGTA ATGGTTTAGA ATTATGGAGC
ACTTCAGTCC TTAAAAACCG TGAGTTAACA GCACCAGCAG TAATTGATAA CTATATTGTT
GTCGGCGACT TTGAAGGTTA CTTACATTTT ATTGACCGTA ATAGCGGCGA TATAGTTGGC
CGAGTTCAAG TTGATAGTAA TGGATTATAT GCCCAACCTT TAGTTGTGGG TGACAAAATC
TATGTTCAAG GTCGTAGTGG CAAAATCGCT ATTGTTATGT TGAACAAAGA AGAACAAATG
AATGTAGAGG AAGATACTGA AACTAATGCG GAATAA
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| Protein sequence | MKSWCKNLLA VGLSVALMSA CSSSDVEEEP VSELVDIQAT VFPEVTWDTS VGDGVGDYYS
QLRPTVRYGK VFVADRSGIV VAFDETTGDE LWKQDFNDVF EEKLETKTKG LRLAAGVTAA
RNKVFVGGET GLLVALDEAT GDVVWSAQAN GELLSAPTVA EDVVAVNTSK GAFEAFNIDN
GKKLWTYEMQ LPNLTLRGTG SAAYEAGGFF LGTADGKVAV VVKSNGQAAW EQPVFSPTGA
NEFTRMADID MTPLVLGENL YVASYNGNLV SMELRSGRVV WSRKYSSFND LAAAGISLYL
VDDHSRIYSV DRRNGLELWS TSVLKNRELT APAVIDNYIV VGDFEGYLHF IDRNSGDIVG
RVQVDSNGLY AQPLVVGDKI YVQGRSGKIA IVMLNKEEQM NVEEDTETNA E
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