| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1117 |
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| Symbol | hisS |
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| ID | 4277038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1318010 |
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| End bp | 1319284 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133891 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_749808 |
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| Protein GI | 114562295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.727727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAAAGC AAATCCAAGC AATTCGCGGA ATGAACGATA TTCTGCCTAC GCAAAGTCCT
TTATGGCAAA AAGTCGAAGC AGTATTGCGT TCATCAGTTA GTGCATTTGG TTATAGCGAA
ATTCGCACTC CCATCGTTGA AAGTACAGAT CTTTTCAAGC GCTCTATTGG TGAAGTGACC
GATATTGTTG AAAAGGAAAT GTACACTTTT GAAGACCGTA ACAGTGACAG TTTAACCTTA
CGCCCAGAAG GTACGGCTTC AACCGTTCGT GCTGGTAATG AACATGGTCT GCTGTATAAC
CAAGAACAAC GTTTATGGTA TATGGGTCCC ATGTTTCGTC ATGAGCGTCC GCAAAAAGGT
CGTTACCGTC AATTCCACCA GTTTGGTGTT GAAGTGTATG GTATTGGTAG CGCCGACATT
GATGCTGAAG TATTAATGTT ATCTGCCCGT TTATGGGATT TACTCGGCAT TAAAGAACAC
GTTGCACTAG AGCTTAATAC GCTAGGCGAC CCCGCTGAGC GCGCCGCTTA CCGTGATGCT
TTAATCGCAT TTCTAGAGCA GCACAAAGAT AAGTTGGATG AAGATAGTCA ACGTCGCATG
TATTCAAATC CATTGCGAGT GTTAGACAGT AAAGATCCGC AAGTGCAAGC CATTTTAGGC
GATGCACCAG CATTGATGGA TTACCTTGGT GAAGACTCTA AGACACATTT TTCAACTTTG
TGTGAACTCT TAGACGCTGT TGGCATCCAA TACACCATCA ATCCGCGTTT AGTCCGTGGT
TTAGATTATT ATAACCGCAC TGTATTTGAA TGGGTTACCA CTAGTTTGGG CTCTCAAGGT
ACAGTATTAG CAGGTGGACG CTACGATGGT TTAGTCGGCC AACTTGGTGG TAAAGACACA
CCTGCGGTTG GCTTTGCTAT GGGACTTGAG CGTATTGTGC TTTTGCTTGA AACGCTTGAG
TTAACCAGTG ATATTGCCCC TGAAGTGGAC GTTTATGTCA CTGCAATGGG TGAAAATTGT
GTCGTTGAAG CCATTAAAGT GGCTCAAGAG TTGCGTCAAC AGTTGCCAAC GCTTAAAGTC
ATGAGCCATT GCGGTGGTGG TAACTTTAAA AAGCAAATGA AACGCGCTGA TAAAAGCGGT
GCCCAATTTG CGTTGATTAT TGGTGAAAAC GAAATAGCCA ACAATCAAGT TGCCATTAAG
CCGTTAAGAA CAAACAATGA ACAACAATTG GTTACGCGTA GTGAACTCGT AGCTAAAATT
GCAGAACTGA TTTAA
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| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKVEAVLR SSVSAFGYSE IRTPIVESTD LFKRSIGEVT
DIVEKEMYTF EDRNSDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFHQFGV EVYGIGSADI DAEVLMLSAR LWDLLGIKEH VALELNTLGD PAERAAYRDA
LIAFLEQHKD KLDEDSQRRM YSNPLRVLDS KDPQVQAILG DAPALMDYLG EDSKTHFSTL
CELLDAVGIQ YTINPRLVRG LDYYNRTVFE WVTTSLGSQG TVLAGGRYDG LVGQLGGKDT
PAVGFAMGLE RIVLLLETLE LTSDIAPEVD VYVTAMGENC VVEAIKVAQE LRQQLPTLKV
MSHCGGGNFK KQMKRADKSG AQFALIIGEN EIANNQVAIK PLRTNNEQQL VTRSELVAKI
AELI
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